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The map label for this gene is yjbQ

Identifier: 30064645

GI number: 30064645

Start: 3452088

End: 3452504

Strand: Direct

Name: yjbQ

Synonym: S3581

Alternate gene names: 30064645

Gene position: 3452088-3452504 (Clockwise)

Preceding gene: 30064644

Following gene: 30064646

Centisome position: 75.06

GC content: 51.32

Gene sequence:

>417_bases
ATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCT
GGCTGATATGCCGCGCGTTAACATCGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGA
ACTGCGATCCCACCGTACGCCACGACATGGAGTGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGAC
TATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTACATAAAGG
GCGTATTCAGACCGGCACTTGGCAAGGCATCTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGA
CACTACAAGGGGAGTAA

Upstream 100 bases:

>100_bases
GAGAGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGA
GTTTTATCAAGGAGCAGCAC

Downstream 100 bases:

>100_bases
AAAATGACCATTTCGGAGTTGCTACAATATTGCATGGCAAAACCAAGCGCAGAACAGAGCGTGCATAACGACTGGAAAGC
GACGCAGATCAAAGTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMECFFLRTVPDNGNYEHD
YEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE

Sequences:

>Translated_138_residues
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMECFFLRTVPDNGNYEHD
YEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE
>Mature_138_residues
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMECFFLRTVPDNGNYEHD
YEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=138, Percent_Identity=99.2753623188406, Blast_Score=284, Evalue=2e-78,
Organism=Drosophila melanogaster, GI221476594, Length=136, Percent_Identity=48.5294117647059, Blast_Score=152, Evalue=6e-38,
Organism=Drosophila melanogaster, GI221476589, Length=136, Percent_Identity=48.5294117647059, Blast_Score=151, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15603; Mature: 15603

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVR
CCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC
HDMECFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLG
CCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCEEECCCCCEEEEC
EHRIHGGSRRIIATLQGE
CEEECCCCEEEEEEEECC
>Mature Secondary Structure
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVR
CCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC
HDMECFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLG
CCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCEEECCCCCEEEEC
EHRIHGGSRRIIATLQGE
CEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]