Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is ygiZ [H]

Identifier: 30064377

GI number: 30064377

Start: 3153678

End: 3154010

Strand: Reverse

Name: ygiZ [H]

Synonym: S3272

Alternate gene names: 30064377

Gene position: 3154010-3153678 (Counterclockwise)

Preceding gene: 30064380

Following gene: 30064374

Centisome position: 68.58

GC content: 34.23

Gene sequence:

>333_bases
ATGTTAAAGCAGAAAATTAAAACAATATTTGAAGCATTGCTATATATAATGCTTACTTATTGGTTAATAGATTCTTTTTT
TGCTTTCAATAAGTATGACTGGATGCTTGAGTCGGGAGGCAATATTTGCAGTATACCTTCCGTTTCAGGCGAAGATCGTA
TATTGCAAGCAATGATTGCAGCATTTTTTCTTCTTACGCCACTTATTATTCTTATCTTAAGAAAACTCTTTATGCGGGAA
ATGTTCGAGTTTTGGCTATATGTATTCTCGCTCGTTATTTGTCTGGTTTGTGGTTGGTGGCTTTTTTGGGGACGGTTTAT
ATTTTGCTATTAG

Upstream 100 bases:

>100_bases
TTTTTGGGGATTGAAAATATGGCTTTGAATAAGTAAAAGATGAAAATATCAACGTGTCATGTTGATAATTATAAATGGAT
TTTTATGAGCGTACTGATAT

Downstream 100 bases:

>100_bases
TAAAATCTATGAGAGTCGTTTTAACGGCTCTCATAGACAGAGAAGTTACCAGCTTACCTTCGCCTCAAATCCACCTTGTT
CCGCATTCCCAAACTCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLKQKIKTIFEALLYIMLTYWLIDSFFAFNKYDWMLESGGNICSIPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMRE
MFEFWLYVFSLVICLVCGWWLFWGRFIFCY

Sequences:

>Translated_110_residues
MLKQKIKTIFEALLYIMLTYWLIDSFFAFNKYDWMLESGGNICSIPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMRE
MFEFWLYVFSLVICLVCGWWLFWGRFIFCY
>Mature_110_residues
MLKQKIKTIFEALLYIMLTYWLIDSFFAFNKYDWMLESGGNICSIPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMRE
MFEFWLYVFSLVICLVCGWWLFWGRFIFCY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789404, Length=110, Percent_Identity=98.1818181818182, Blast_Score=216, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13257; Mature: 13257

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQKIKTIFEALLYIMLTYWLIDSFFAFNKYDWMLESGGNICSIPSVSGEDRILQAMIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH
AFFLLTPLIILILRKLFMREMFEFWLYVFSLVICLVCGWWLFWGRFIFCY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKQKIKTIFEALLYIMLTYWLIDSFFAFNKYDWMLESGGNICSIPSVSGEDRILQAMIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH
AFFLLTPLIILILRKLFMREMFEFWLYVFSLVICLVCGWWLFWGRFIFCY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]