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The map label for this gene is yphH

Identifier: 30063937

GI number: 30063937

Start: 2661322

End: 2662515

Strand: Direct

Name: yphH

Synonym: S2769

Alternate gene names: 30063937

Gene position: 2661322-2662515 (Clockwise)

Preceding gene: 30063932

Following gene: 30063939

Centisome position: 57.86

GC content: 51.26

Gene sequence:

>1194_bases
ATGAGAGCCTGCATTAACAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCG
CGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCG
AAAAACGGGTGGTGAATATTGACGATGAAAGCCAGACGCGCGGGCATAGTAGCGGTACATGGCTGATTGCGCCGGAAGGT
GACTGGACGCTGTGCCTGAACGTGACGCCCACCAGTATTGAGTGTCAGGTTGCTAATGCTTGTTTAAGTCCGAAAGGCGA
ATTTGAGTATTTACAGATTGATGTACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTA
AATTGTGGCCGGACCGCACCATCAATCTGGCGCTGGCAATCCACGGGCAGGTTGATCCGGTGACCGGCGTATCGCAAACC
ATGCCGCAAGCGCCGTGGACAACGCCAGTTGAGGTGAAGTATCTGCTGGAAGAGAAGCTGGGCATTCGGGTGCTGGTCGA
TAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTG
ATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCAC
ACCATCGTTAATCCGGATGGAGTCGTCTGCGACTGTGGACGTTACGGCAGCCTGGAAACCGTCGCCTCGTTAAGTGCATT
AAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAATACTCAGCTTGAGCCTGAAAAACTGACAACCGCGCAGT
TAATCGCTGCCTGGCAGAGTGGAGAACCGTGGATCACCAGCTGGGTTGATCGCTCTGCCAATGCCATTGGTTTGAGTCTG
TATAACTTCCTCAACATCCTCAATATTAATCAGATTTGGTTGTACGGTCGCAGTTGTGCCTTTGGTGAGAACTGGCTTAA
TACTATTATTCGCCAGACAGGATTTAACCCGTTCGACCGCGACGAAGGACCGAGCGTGAAAGCGACGCAAATTGGCTTCG
GGCAATTAAGCCGCGCACAACAGGTGCTGGGAATTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGA

Upstream 100 bases:

>100_bases
CAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAA
CTAAACAAGGTTTAGTGAAG

Downstream 100 bases:

>100_bases
TGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTAT
CAGGCCTACACGGAGATTGC

Product: putative NAGC-like transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEG
DWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDVPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT
MPQAPWTTPVEVKYLLEEKLGIRVLVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH
TIVNPDGVVCDCGRYGSLETVASLSALKKQARVWLKSQPVNTQLEPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSL
YNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI

Sequences:

>Translated_397_residues
MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEG
DWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDVPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT
MPQAPWTTPVEVKYLLEEKLGIRVLVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH
TIVNPDGVVCDCGRYGSLETVASLSALKKQARVWLKSQPVNTQLEPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSL
YNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI
>Mature_397_residues
MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEG
DWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDVPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT
MPQAPWTTPVEVKYLLEEKLGIRVLVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH
TIVNPDGVVCDCGRYGSLETVASLSALKKQARVWLKSQPVNTQLEPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSL
YNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI298566315, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI298566325, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI4885285, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI190014632, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87082127, Length=397, Percent_Identity=98.4886649874055, Blast_Score=809, Evalue=0.0,
Organism=Escherichia coli, GI1787878, Length=333, Percent_Identity=24.024024024024, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1786891, Length=222, Percent_Identity=28.3783783783784, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 44575; Mature: 44575

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNI
CCCCCCCCHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEC
DDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDVPTPQA
CCCHHCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEHHHCCCCCCEEEEEEECCCHHH
LLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYLLEEKL
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCCHHHHEEEHHCC
GIRVLVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH
CEEEEECCCEEEEEEHHHHCCCCCCCCEEEEEECCCCCCEEEEECHHEECCCCCCCCCCC
TIVNPDGVVCDCGRYGSLETVASLSALKKQARVWLKSQPVNTQLEPEKLTTAQLIAAWQS
EEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCC
GEPWITSWVDRSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDR
CCCHHHHHHHCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC
DEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI
CCCCCEEEEEECCHHHHHHHHHHHEEEEEEEEHHHCC
>Mature Secondary Structure
MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNI
CCCCCCCCHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEC
DDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDVPTPQA
CCCHHCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEHHHCCCCCCEEEEEEECCCHHH
LLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYLLEEKL
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCCHHHHEEEHHCC
GIRVLVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH
CEEEEECCCEEEEEEHHHHCCCCCCCCEEEEEECCCCCCEEEEECHHEECCCCCCCCCCC
TIVNPDGVVCDCGRYGSLETVASLSALKKQARVWLKSQPVNTQLEPEKLTTAQLIAAWQS
EEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCC
GEPWITSWVDRSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDR
CCCHHHHHHHCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC
DEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI
CCCCCEEEEEECCHHHHHHHHHHHEEEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]