| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063897
Identifier: 30063897
GI number: 30063897
Start: 2612123
End: 2612344
Strand: Reverse
Name: 30063897
Synonym: S2722
Alternate gene names: NA
Gene position: 2612344-2612123 (Counterclockwise)
Preceding gene: 30063898
Following gene: 30063896
Centisome position: 56.8
GC content: 50.0
Gene sequence:
>222_bases ATGCAAAATATAAAGACCCTCATCAACAGGAAGAAGCTCCTGGAGATGATCCCGCTTTCGACACGAACAATTTATAACCT GGAGCAGCGAGGGGATTTTCCACGCCGTATCGCGTTAACCAGTAGAAATGTCGCCTGGGATTTGTCAGAGGTCGAAGAGT GGATTGAGGCACGTAAATCATCGGGTGATCAAGCTGCGCGACCTGGCCCTATAGAGGGCTAG
Upstream 100 bases:
>100_bases AAATAAGGCCGCCATTGGCATCGGGCAGGTCAATTACCGATTAGCTGCTTCGCGCAGCTACTCGATGAATAGCAACTATT CATTTGAGAGGTATTGACCC
Downstream 100 bases:
>100_bases TTATATGGCTCTTGATCTTATGGCGGCTTTCACGGAATTGCCGCCACCCATTGATTATGTTCTGCCTAATATGGTTGCTG GCACTGTTGGTGCTCTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Transcriptional Regulator; Prophage CP4-57 Regulatory; Phage Transcriptional Regulator Alpa; AlpA Family Transcriptional Regulator; Prophage Regulatory Protein; Regulatory Protein Alpa Family; Prophage Cp4-57 Regulatory
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MQNIKTLINRKKLLEMIPLSTRTIYNLEQRGDFPRRIALTSRNVAWDLSEVEEWIEARKSSGDQAARPGPIEG
Sequences:
>Translated_73_residues MQNIKTLINRKKLLEMIPLSTRTIYNLEQRGDFPRRIALTSRNVAWDLSEVEEWIEARKSSGDQAARPGPIEG >Mature_73_residues MQNIKTLINRKKLLEMIPLSTRTIYNLEQRGDFPRRIALTSRNVAWDLSEVEEWIEARKSSGDQAARPGPIEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8410; Mature: 8410
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNIKTLINRKKLLEMIPLSTRTIYNLEQRGDFPRRIALTSRNVAWDLSEVEEWIEARKS CCHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCEEEECCCCCEECHHHHHHHHHHHHC SGDQAARPGPIEG CCCCCCCCCCCCC >Mature Secondary Structure MQNIKTLINRKKLLEMIPLSTRTIYNLEQRGDFPRRIALTSRNVAWDLSEVEEWIEARKS CCHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCEEEECCCCCEECHHHHHHHHHHHHC SGDQAARPGPIEG CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA