| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063890
Identifier: 30063890
GI number: 30063890
Start: 2604636
End: 2605703
Strand: Direct
Name: 30063890
Synonym: S2711
Alternate gene names: NA
Gene position: 2604636-2605703 (Clockwise)
Preceding gene: 30063889
Following gene: 30063901
Centisome position: 56.63
GC content: 62.83
Gene sequence:
>1068_bases ATGAGCGCCGGCGCACAGGCCATCGCCGCGAAGCCGCGCCAGGCCCCGATGAGCGGCTTCGAGCGTTACCTGACGCTGTG GGTGGCCCTGTGCATCGTCGCCGGTGTTGCGCTCGGCCAGGGCCTTCCTGACGTGTTCCAGGCCATAGGCCGCATGGAAG TGGCCCAGGTCAATTTGCCGGTGGGCCTGCTGATTTGGGTAATGATCGTCCCGATGCTGGTCAAGATCGACTTCGGGGCG CTGCACCAGGTCAAAGAGCATTGGCGCGGCATCGGCGTCACGCTGTTCGTGAATTGGGCCGTCAAGCCATTCTCGATGGC CCTGCTGGGGTGGCTGTTCATCCGACAAGTGTTCGCTCCGTTCCTGCCGGCCGATCAACTGGACAGCTACATCGCGGGCT TGATCTTGCTGGCCGCCGCGCCCTGCACGGCAATGGTGTTCGTGTGGAGCCGCCTTACCAACGGCGACCCGCTTTTCACG CTCTCGCAAGTGGCTCTGAACGACGCCATCATGATCGTGGCCTTCGCGCCCATCGTCGGCCTGCTGCTGGGCATGTCCTC GATCTCGGTGCCTTGGGACACGCTGCTGATTTCGGTCGTGCTCTACATCATCGTGCCGGTGATCCTGGCGCAGCTCTTGC GGCGGCATCTGCTCAAGCAAGGACAGGCCGCCTTTGAACGGGCCATGCAGAAGATCGGGCCGTGGTCGATGGCCGCGCTG CTGCTGACGTTGGTTCTACTGTTCGCCTTCCAGGGCGAGGCCATCATCCGGCAGCCGTTAGTGATCGCCATGCTAGCCGT GCCGATCTTGATTCAAGTGTTCTTCAATTCCGGGTTAGCCTACTGGCTGAACAAGCGGGCGGGGGAAAAGCACTCTGTCG CCTGTCCTTCGGCCCTGATCGGTGCCAGCAACTTCTTCGAGCTGGCCGTGGCGGCCGCCATCAGCTTGTTCGGTCTGCAC TCCGGCGCTGCATTGGCAACCGTGGTCGGCGTCCTGGTCGAAGTGCCGGTGATGCTGCTGGTCGTGCGCGTGGTGAATCG CTCGAAGAGCTGGTACGAACGAGGTTGA
Upstream 100 bases:
>100_bases TGAACCGCGTCCGCCTGTTCGTGAATCTGCCTCTCAAAATGCTTGACCAGACGGCCATCAAGCGCGAGCTGGCGAACATC GGCAAGACCGAGCAGGAAGC
Downstream 100 bases:
>100_bases ACATGAGTAGGAAAAAACTGAGGAAATGATTGCAGATTGCCGCGCCGGCCGCTTCCTGGCGCATTCGATCACTGACCTGG AACACCTAGTATCCATGCTT
Product: putative sodium bile acid symporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSAGAQAIAAKPRQAPMSGFERYLTLWVALCIVAGVALGQGLPDVFQAIGRMEVAQVNLPVGLLIWVMIVPMLVKIDFGA LHQVKEHWRGIGVTLFVNWAVKPFSMALLGWLFIRQVFAPFLPADQLDSYIAGLILLAAAPCTAMVFVWSRLTNGDPLFT LSQVALNDAIMIVAFAPIVGLLLGMSSISVPWDTLLISVVLYIIVPVILAQLLRRHLLKQGQAAFERAMQKIGPWSMAAL LLTLVLLFAFQGEAIIRQPLVIAMLAVPILIQVFFNSGLAYWLNKRAGEKHSVACPSALIGASNFFELAVAAAISLFGLH SGAALATVVGVLVEVPVMLLVVRVVNRSKSWYERG
Sequences:
>Translated_355_residues MSAGAQAIAAKPRQAPMSGFERYLTLWVALCIVAGVALGQGLPDVFQAIGRMEVAQVNLPVGLLIWVMIVPMLVKIDFGA LHQVKEHWRGIGVTLFVNWAVKPFSMALLGWLFIRQVFAPFLPADQLDSYIAGLILLAAAPCTAMVFVWSRLTNGDPLFT LSQVALNDAIMIVAFAPIVGLLLGMSSISVPWDTLLISVVLYIIVPVILAQLLRRHLLKQGQAAFERAMQKIGPWSMAAL LLTLVLLFAFQGEAIIRQPLVIAMLAVPILIQVFFNSGLAYWLNKRAGEKHSVACPSALIGASNFFELAVAAAISLFGLH SGAALATVVGVLVEVPVMLLVVRVVNRSKSWYERG >Mature_354_residues SAGAQAIAAKPRQAPMSGFERYLTLWVALCIVAGVALGQGLPDVFQAIGRMEVAQVNLPVGLLIWVMIVPMLVKIDFGAL HQVKEHWRGIGVTLFVNWAVKPFSMALLGWLFIRQVFAPFLPADQLDSYIAGLILLAAAPCTAMVFVWSRLTNGDPLFTL SQVALNDAIMIVAFAPIVGLLLGMSSISVPWDTLLISVVLYIIVPVILAQLLRRHLLKQGQAAFERAMQKIGPWSMAALL LTLVLLFAFQGEAIIRQPLVIAMLAVPILIQVFFNSGLAYWLNKRAGEKHSVACPSALIGASNFFELAVAAAISLFGLHS GAALATVVGVLVEVPVMLLVVRVVNRSKSWYERG
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=354, Percent_Identity=24.8587570621469, Blast_Score=95, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 38447; Mature: 38316
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGAQAIAAKPRQAPMSGFERYLTLWVALCIVAGVALGQGLPDVFQAIGRMEVAQVNLP CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCC VGLLIWVMIVPMLVKIDFGALHQVKEHWRGIGVTLFVNWAVKPFSMALLGWLFIRQVFAP HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHC FLPADQLDSYIAGLILLAAAPCTAMVFVWSRLTNGDPLFTLSQVALNDAIMIVAFAPIVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLLGMSSISVPWDTLLISVVLYIIVPVILAQLLRRHLLKQGQAAFERAMQKIGPWSMAAL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH LLTLVLLFAFQGEAIIRQPLVIAMLAVPILIQVFFNSGLAYWLNKRAGEKHSVACPSALI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHH GASNFFELAVAAAISLFGLHSGAALATVVGVLVEVPVMLLVVRVVNRSKSWYERG CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure SAGAQAIAAKPRQAPMSGFERYLTLWVALCIVAGVALGQGLPDVFQAIGRMEVAQVNLP CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCC VGLLIWVMIVPMLVKIDFGALHQVKEHWRGIGVTLFVNWAVKPFSMALLGWLFIRQVFAP HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHC FLPADQLDSYIAGLILLAAAPCTAMVFVWSRLTNGDPLFTLSQVALNDAIMIVAFAPIVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLLGMSSISVPWDTLLISVVLYIIVPVILAQLLRRHLLKQGQAAFERAMQKIGPWSMAAL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH LLTLVLLFAFQGEAIIRQPLVIAMLAVPILIQVFFNSGLAYWLNKRAGEKHSVACPSALI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHH GASNFFELAVAAAISLFGLHSGAALATVVGVLVEVPVMLLVVRVVNRSKSWYERG CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]