| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is ypfG [H]
Identifier: 30063846
GI number: 30063846
Start: 2547870
End: 2548913
Strand: Reverse
Name: ypfG [H]
Synonym: S2659
Alternate gene names: 30063846
Gene position: 2548913-2547870 (Counterclockwise)
Preceding gene: 30063847
Following gene: 30063843
Centisome position: 55.42
GC content: 54.12
Gene sequence:
>1044_bases ATGCGCTATCGCATTTTCCTTCTCTTTTTTTTCGCTTTGTTGCCGACGTCTTTGGTGTGGGCGGCACCAGCGCAACGGGC GTTTTCCGACTGGCAGGTCACCTGTAATAATCAAAATTTTTGTGTGGCGCGCAATACGGGCGATCATAATGGACTGGTGA TGACCCTGAGCCGCAGCGCTGGGGCGCATACCGATGCCGTTTTACGTATTGAGCGCGGTGGGTTGAAGTCGCCGGATGCG TCTGAAGGGGAGATAGCGCCACGGCTGCTATTAGATGGTGAGCCGTTGGCATTAAGTGGTGACAAGTGGCGGATTTCACC ATGGTTATTAGTAACCGATGATACGGCAACCATCACCGCGTTTTTGCAGATAATTCAGGAAGGGAAGGCGATCACCTTAC GCGACGGCAATCAGACCATTTCTCTGAGCGGCTTAAAAGCGGCGTTGTTGTTTATTGATGCTCAGCAAAAGCGCGTTGGC AGTGAAACCGCGTGGATCAAGAAAGGGGACGAACCGCCTCTCAGCGTACCGCCCGCGCCTGCGCTGAAAGAGGTCGCGGT GGTTAACCCAACGCCGACGCCACTCTCACTCGAAGAACGTAACGATTTGCTGGATTATGGAAACTGGCGGATGAATGGTC TGCGCTGCTCGCTTGATCCGTTACGTCGTGAGGTGAATGTCACTGCGCTGACCGATGATAAAGCACTGATGATGATTAGC TGTGAGGCAGGGGCCTATAACACCATTGATTTGGCATGGATTGTGTCGCGTAAAAAGCCGCTAGCCTCGCGCCCGGTTCG GTTGCGTTTGCCGTTCAACAACGGCCAGGAGACGAATGAACTGGAACTGATGAACGCAACATTTGATGAGAAATCGCGTG AACTGGTGACCTTAGCGAAAGGGCGCGGATTAAGCGATTGTGGCATTCAGGCGCGCTGGCGCTTTGACGGTCAGCGTTTT CGCCTGGTGCGTTACGCCGCAGAACCTACCTGCGATAACTGGCATGGGCCAGACGCCAGGCCCACGTTGTGGATCACCCG TTAA
Upstream 100 bases:
>100_bases TATTATTGGCTCAATCCGACAAATCCGATTGAGCCGCGCTACCTGCGCAACGAAGATACGACTTGTGCTGTTTGTTTGAA CTTCTGGGGTCGTACCGTCC
Downstream 100 bases:
>100_bases ACAAAATCGCAGATGCGGCCCTAAAAAGCGCACGGACCGTCCCCTCGCCCTTCTGGGGAGAGGGTTAGGGTGAGGGGAAC ATACAGCATCCGGCGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPDA SEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQIIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRF RLVRYAAEPTCDNWHGPDARPTLWITR
Sequences:
>Translated_347_residues MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPDA SEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQIIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRF RLVRYAAEPTCDNWHGPDARPTLWITR >Mature_347_residues MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPDA SEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQIIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRF RLVRYAAEPTCDNWHGPDARPTLWITR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788809, Length=347, Percent_Identity=98.8472622478386, Blast_Score=701, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009560 [H]
Pfam domain/function: PF06674 DUF1176 [H]
EC number: NA
Molecular weight: Translated: 38684; Mature: 38684
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSA CEEEEHHHHHHHHHHHHHEECCCHHHCCCCCEEEECCCCEEEECCCCCCCCEEEEEECCC GAHTDAVLRIERGGLKSPDASEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITA CCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEECCCCEEECEEEEEECCCHHHHH FLQIIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAP HHHHHHCCCEEEEECCCCEEEECCCEEEEEEEECHHHHCCCCEEEEECCCCCCCCCCCCC ALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CCCCEEEECCCCCCCCHHCCCCCCCCCCEEECCEEECCCHHCCEEEEEEEECCCEEEEEE CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAK ECCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEC GRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDARPTLWITR CCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSA CEEEEHHHHHHHHHHHHHEECCCHHHCCCCCEEEECCCCEEEECCCCCCCCEEEEEECCC GAHTDAVLRIERGGLKSPDASEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITA CCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEECCCCEEECEEEEEECCCHHHHH FLQIIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAP HHHHHHCCCEEEEECCCCEEEECCCEEEEEEEECHHHHCCCCEEEEECCCCCCCCCCCCC ALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CCCCEEEECCCCCCCCHHCCCCCCCCCCEEECCEEECCCHHCCEEEEEEEECCCEEEEEE CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAK ECCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEC GRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDARPTLWITR CCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]