| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yfeY [H]
Identifier: 30063824
GI number: 30063824
Start: 2524710
End: 2525285
Strand: Reverse
Name: yfeY [H]
Synonym: S2633
Alternate gene names: 30063824
Gene position: 2525285-2524710 (Counterclockwise)
Preceding gene: 30063825
Following gene: 30063823
Centisome position: 54.91
GC content: 50.35
Gene sequence:
>576_bases ATGAAATCGCTGCGTTTAATGTTATGCGCTATGCCGTTGATGCTGACCGGCTGTTCCACGATGTCGTCAGTTAACTGGTC TGCCGCTAACCCGTGGAACTGGTTTGGATCGTCCACCAAAGTGAGCGAGCAGGGCGTGGGTGAATTAACGGCGTCCACAC CACTGCAAGAACAAGCCATTGCTGATGCGCTTGATGGCGATTATCGCCTGCGCAGCGGAATGAAAACCACGAACGGCAAC GTGGTGCGCTTTTTTGAAGTGATGAAAGGCGACAACGTGGCGATGGTGATTAACGGCGATCAAGGCACGATCAGTCGCAT TGACGTGCTGGATAGCGATATTCCTGCTGACACCGGTGTTAAAATCGGTACACCGTTTAGCGACCTTTACAGCAAAGCAT TTGGCAATTGCCAAAAAGCTGATGGTGATGATAATCGTGCCGTCGAATGTAAAGCCGAAGGCAGTCAACATATTAGCTAC CAGTTCAGCGGGGAATGGCGTGGTCCTGAAGGGTTAATGCCTTCGGACGATACCCTGAAAAACTGGAAAGTCAGTAAAAT TATCTGGCGGCGTTAA
Upstream 100 bases:
>100_bases TCGACGTTTACGCGCTTGTTTTAATGAAGAAAAAGAATAACGGCACTTTTTGGTGAATTTGCACTCCAAGCAACGTTATT GAATAACCAAAGGAAGTGAC
Downstream 100 bases:
>100_bases TTTGCGTCTGAACAAACCGCCGTCGCGAAAAAACACGTAAAATAGCGCTCAACAATGCCACGGATTGCGTGGCATTCTTA TTTTCAGGAGGAACAATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTTNGN VVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY QFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR
Sequences:
>Translated_191_residues MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTTNGN VVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY QFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR >Mature_191_residues MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTTNGN VVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY QFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788772, Length=191, Percent_Identity=99.4764397905759, Blast_Score=395, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010938 - ProDom: PD105195 [H]
Pfam domain/function: PF06572 DUF1131 [H]
EC number: NA
Molecular weight: Translated: 20928; Mature: 20928
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAI CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH ADALDGDYRLRSGMKTTNGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGV HHHCCCCHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCE KIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFSGEWRGPEGLMPSDDTLK ECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC NWKVSKIIWRR CEEEHHEEECC >Mature Secondary Structure MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAI CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH ADALDGDYRLRSGMKTTNGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGV HHHCCCCHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCE KIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFSGEWRGPEGLMPSDDTLK ECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC NWKVSKIIWRR CEEEHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 7764507 [H]