| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is cysW
Identifier: 30063816
GI number: 30063816
Start: 2516241
End: 2516690
Strand: Reverse
Name: cysW
Synonym: S2624
Alternate gene names: 30063816
Gene position: 2516690-2516241 (Counterclockwise)
Preceding gene: 30063817
Following gene: 30063815
Centisome position: 54.72
GC content: 57.33
Gene sequence:
>450_bases ATGTTCTCCTGGCCCGGAATGGTGCTGGTCACCATCTTTGTGACGTGTCCGTTTGTGGTGCGCGAGCTGGTGCCGGTGAT GTTAAGCCAGGGCAGCCAGGAAGACGAAGCGGCGATTTTGCTTGGCGCGTCCGGCTGGCAGATGTTCCGTCGCGTCACAT TGCCGAATATTCGCTGGGCGCTGCTTTACGGCGTGGTGCTGACCAACGCCCGCGCGATTGGCGAGTTTGGTGCAGTGTCG GTGGTTTCCGGCTCGATTCGCGGCGAAACACTTTCGCTGCCGTTACAGATTGAATTGTTGGAGCAGGACTACAACACCGT CGGCTCCTTTACCGCCGCCGCGCTGTTGACGTTGATGGCGATTATCACCCTGTTTTTAAAGAGTATGTTGCAGTGGCGCC TGGAGAATCAGGAAAAACGCGCGCAGCAGGAGGAGCATCATGAGCATTGA
Upstream 100 bases:
>100_bases GTTTGCTGTATCGCCGGTGGTTGCCGGTCTGGTGTATCTGCTGTTCTACGGCTCCAACGGCCCGCTCGGCGGCTGGCTGG ATGAACATAATCTGCAAATT
Downstream 100 bases:
>100_bases GATTGCCAATATCAAGAAGTCTTTTGGTCGCACCCAGGTGCTGAACGATATCTCACTGGATATTCCTTCTGGTCAGATGG TCGCGTTGCTGGGGCCGTCC
Product: sulfate transport system permease W protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVS VVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKRAQQEEHHEH
Sequences:
>Translated_149_residues MFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVS VVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKRAQQEEHHEH >Mature_149_residues MFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVS VVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKRAQQEEHHEH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain
Homologues:
Organism=Escherichia coli, GI87082099, Length=149, Percent_Identity=100, Blast_Score=302, Evalue=7e-84, Organism=Escherichia coli, GI1788764, Length=105, Percent_Identity=41.9047619047619, Blast_Score=80, Evalue=5e-17, Organism=Escherichia coli, GI1786980, Length=144, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSW_ECOL6 (P0AEB1)
Other databases:
- EMBL: AE014075 - RefSeq: NP_754839.1 - ProteinModelPortal: P0AEB1 - SMR: P0AEB1 - EnsemblBacteria: EBESCT00000041609 - GeneID: 1038593 - GenomeReviews: AE014075_GR - KEGG: ecc:c2957 - GeneTree: EBGT00050000008926 - HOGENOM: HBG685300 - OMA: LQIELLY - ProtClustDB: PRK11602 - InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 - TIGRFAMs: TIGR00969 - TIGRFAMs: TIGR02140
Pfam domain/function: PF00528 BPD_transp_1
EC number: NA
Molecular weight: Translated: 16676; Mature: 16676
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1400063c)-; HASH(0x141a5d80)-; HASH(0x1403e038)-; HASH(0x141b1428)-; HASH(0x11b75934)-; HASH(0x13c67900)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHCCCCHHHH LLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMA HHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH IITLFLKSMLQWRLENQEKRAQQEEHHEH HHHHHHHHHHHHHHCCHHHHHHHHHCCCH >Mature Secondary Structure MFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHCCCCHHHH LLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMA HHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH IITLFLKSMLQWRLENQEKRAQQEEHHEH HHHHHHHHHHHHHHCCHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157