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The map label for this gene is yfcN [H]

Identifier: 30063757

GI number: 30063757

Start: 2436186

End: 2436737

Strand: Direct

Name: yfcN [H]

Synonym: S2541

Alternate gene names: 30063757

Gene position: 2436186-2436737 (Clockwise)

Preceding gene: 161486457

Following gene: 30063765

Centisome position: 52.97

GC content: 52.9

Gene sequence:

>552_bases
ATGAAAAAGAAAACAACACTTAGCGAGGAGGACCAGGCTCTGTTTCGCCAGTTGATGGCGGGGACTCGCAAGATTAAGCA
GGACACGATTGTCCACCGACCGCAGCGTAAAAAAATCAGCGAAGTGCCGGTGAAACGCTTGATCCAGGAGCAGGCTGATG
CCAGCCATTATTTCTCCGATGAGTTTCAGCCGTTATTAAATACCGAAGGTCCGGTGAAATATGTTCGCCCGGATGTCAGC
CATTTTGAGGCGAAGAAACTGCGCCGCGGCGATTATTCACCGGAATTGTTTTTGGATTTACACGGTCTGACGCAGCTGCA
GGCCAAGCAGGAACTGGGCGCGTTGATTGCCGCCTGTCGCCGCGAACATGTGTTTTGTGCCTGCGTGATGCATGGGCACG
GGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCATTTCACCAGGCACCGAAA
GAGTACGGCGGTGATGCGGCTTTGTTGGTGTTGATTGAAGTGGAAGAGTGGTTGCCGCCGGAGTTGCCCTGA

Upstream 100 bases:

>100_bases
CAGCATTCACGCGCGGTGAGTGAGGAAAAATACGTTTAAAACGATCGATTGTGCTACGAGTCGGGTAAACTGTAGGAAAA
TTAGAAATAGAGACAGATAA

Downstream 100 bases:

>100_bases
ATGCTGGCAGCAAATGCCGGAGCAGCGTAAACGCCTTATCCGGCCTACAAATATGTGATAATTCAATAAATTGCAATTCA
CTTCGTAGGCCTGATAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVS
HFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
EYGGDAALLVLIEVEEWLPPELP

Sequences:

>Translated_183_residues
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVS
HFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
EYGGDAALLVLIEVEEWLPPELP
>Mature_183_residues
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVS
HFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
EYGGDAALLVLIEVEEWLPPELP

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=183, Percent_Identity=100, Blast_Score=378, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 21014; Mature: 21014

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACR
HHHHHHCCCCCCEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
REHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPP
HCCEEEEEEECCCCHHHHHHCCCEEECCCCCEEEHHHCHHHHCCCEEEEEEEEHHHCCCC
ELP
CCC
>Mature Secondary Structure
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACR
HHHHHHCCCCCCEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
REHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPP
HCCEEEEEEECCCCHHHHHHCCCEEECCCCCEEEHHHCHHHHCCCEEEEEEEEHHHCCCC
ELP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]