| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yfcF
Identifier: 30063727
GI number: 30063727
Start: 2407410
End: 2408054
Strand: Reverse
Name: yfcF
Synonym: S2512
Alternate gene names: 30063727
Gene position: 2408054-2407410 (Counterclockwise)
Preceding gene: 30063731
Following gene: 30063726
Centisome position: 52.36
GC content: 51.94
Gene sequence:
>645_bases ATGAGTAAACCCGCTATCACGCTTTGGTCAGATGCCCACTTTTTCTCCCCTTATGTGTTATCCGCCTGGGTGGCGTTGCA GGAAAAAGGCCTGTCGTTTCATATCAAGACCATCGACCTCGACAGCGGTGAACATTTGCAGCCGACGTGGCAAGGTTACG GTCAGACACGCCGTGTGCCGTTATTACAAATCGATGATTTTGAGTTGAGTGAATCTTCTGCCATTGCGGAGTATCTGGAA GATCGATTTGCGCCACCGACCTGGGAACGTATTTATCCGCTTGATTTAGAAAATCGTGCGCGTGCACGACAGATTCAGGC CTGGCTGCGCAGCGATCTGATGCCCATCCGCGAAGAGCGTCCGACGGATGTTGTCTTTGCGGGGGCGAAAAAAGCGCCAC TAACGGCCGAGGGAAAAGCCAGTGCAGAGAAACTGTTCGCGATGGCAGAACATTTGTTAGCACTGGGTCAGCCGAATTTA TTTGGTGAATGGTGCATTGCTGATACTGATCTGGCGCTAATGATTAACCGCCTGGTACTACATGGCGATGAGGTGCCAGA ACGCCTGGTGGATTATGCGACATTCCAGTGGCAGCGAGCGTCTGTCCAGCGTTTTATTGCACTTTCGGCGAAGCAATCTG GCTGA
Upstream 100 bases:
>100_bases AGTATAGAAAGCGCGGCGACTTACGTGAGTATTCGTCACGTGACAGTGACAAAAAGGCTCTATAGTTTGATAGCCAGCCC CCTTTATTGCCGAGGACATA
Downstream 100 bases:
>100_bases TAGCAACGACAGAATCCAGTATCATAGCTTACGTTTTTTCGACGAGGAGTGAGTGATGAAACTGATGTTTGCATCGGACA TTCATGGGTCGTTACCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLE DRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNL FGEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG
Sequences:
>Translated_214_residues MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLE DRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNL FGEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG >Mature_213_residues SKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLED RFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNLF GEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788639, Length=214, Percent_Identity=99.5327102803738, Blast_Score=437, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 24298; Mature: 24167
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVP CCCCCEEEECCCCHHCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCE LLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREER EEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC PTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNLFGEWCIADTDLALMINRLVL CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH HGDEVPERLVDYATFQWQRASVQRFIALSAKQSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVP CCCCEEEECCCCHHCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCE LLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREER EEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC PTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNLFGEWCIADTDLALMINRLVL CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH HGDEVPERLVDYATFQWQRASVQRFIALSAKQSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]