| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is menB
Identifier: 30063693
GI number: 30063693
Start: 2368149
End: 2369006
Strand: Reverse
Name: menB
Synonym: S2475
Alternate gene names: 30063693
Gene position: 2369006-2368149 (Counterclockwise)
Preceding gene: 30063694
Following gene: 30063692
Centisome position: 51.51
GC content: 55.13
Gene sequence:
>858_bases ATGATTTATCCTGATGAAGCAATGCCTTACGCACCGGTTGAATGGCACGACTGCTCCGAAGGTTTCGAGGACATTCGTTA TGAAAAATCCACCGACGGTATCGCAAAAATCACCATTAATCGTCCGCAGGTGCGCAATGCCTTCCGTCCTCTGACGGTAA AAGAGATGATCCAGGCACTGGCAGATGCGCGTTATGACGACAATATCGGCGTGATCATTCTGACTGGCGCAGGCGATAAA GCGTTCTGCTCCGGTGGTGACCAGAAAGTGCGTGGTGATTACGGCGGCTATAAAGATGATTCCGGCGTACATCACCTGAA CGTGCTGGACTTCCAGCGTCAGATCCGTACCTGTCCGAAACCGGTTGTCGCGATGGTGGCTGGCTACTCCATCGGCGGTG GTCACGTTCTGCACATGATGTGCGACCTGACTATCGCAGCAGATAATGCCATCTTCGGTCAGACTGGCCCGAAAGTCGGT TCCTTCGACGGCGGCTGGGGCGCTTCCTACATGGCTCGTATCGTCGGGCAGAAAAAAGCGCGAGAAATCTGGTTCCTGTG CCGTCAGTACGACGCAAAACAGGCGCTGGATATGGGCCTTGTCAACACCGTGGTACCGCTGGCGGATCTGGAAAAAGAAA CCGTCCGTTGGTGCCGCGAAATGCTGCAAAACAGCCCGATGGCGCTGCGCTGCCTGAAAGCTGCGCTGAACGCCGACTGT GACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTCTACATGACGGAAGAAGGTCAGGAAGGTCG CAACGCTTTCAACCAGAAACGTCAGCCTGATTTCAGCAAATTTAAACGGAATCCGTAA
Upstream 100 bases:
>100_bases ATGTCATTCCTCGCGCCGGACATAACGCGCATCGGGAAAATCCCGCTGGCGTAATCGCAAGTCTGGCGCAGATCTTGCGT TTCTGACTAAAGGACACAAT
Downstream 100 bases:
>100_bases TGCGTAGCGCGCAGGTATACCGCTGGCAGATCCCCATGGACGCGGGGGTGGTTCTGCGCGACAGGCGGTTAAAAACCCGC GACGGGCTGTACGTTTGCCT
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MIYPDEAMPYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDK AFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP
Sequences:
>Translated_285_residues MIYPDEAMPYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDK AFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP >Mature_285_residues MIYPDEAMPYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDK AFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=271, Percent_Identity=32.4723247232472, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI31542718, Length=252, Percent_Identity=30.952380952381, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI45643119, Length=220, Percent_Identity=30.4545454545455, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI260275230, Length=220, Percent_Identity=30.4545454545455, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI260274832, Length=220, Percent_Identity=30.4545454545455, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI4502327, Length=259, Percent_Identity=28.1853281853282, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI213417737, Length=224, Percent_Identity=25, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI157694516, Length=224, Percent_Identity=25, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI70995211, Length=240, Percent_Identity=27.5, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI37594469, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI37594471, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI4757966, Length=245, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI51538581, Length=245, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI25453481, Length=245, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI51538573, Length=245, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI4757968, Length=236, Percent_Identity=25.8474576271186, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI49355787, Length=236, Percent_Identity=25.8474576271186, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1788597, Length=285, Percent_Identity=99.6491228070175, Blast_Score=594, Evalue=1e-171, Organism=Escherichia coli, GI1787659, Length=247, Percent_Identity=31.9838056680162, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI87082183, Length=257, Percent_Identity=27.2373540856031, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI221142681, Length=200, Percent_Identity=32, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787660, Length=257, Percent_Identity=29.5719844357977, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788682, Length=229, Percent_Identity=24.8908296943231, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25145438, Length=255, Percent_Identity=30.9803921568627, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17554946, Length=265, Percent_Identity=30.188679245283, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17540714, Length=234, Percent_Identity=27.7777777777778, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17535521, Length=247, Percent_Identity=25.9109311740891, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17534483, Length=271, Percent_Identity=27.3062730627306, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17549921, Length=197, Percent_Identity=25.3807106598985, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17536985, Length=223, Percent_Identity=24.2152466367713, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI20129971, Length=266, Percent_Identity=33.0827067669173, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24653477, Length=266, Percent_Identity=33.0827067669173, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24653139, Length=261, Percent_Identity=27.5862068965517, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI21357171, Length=262, Percent_Identity=28.6259541984733, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI24654903, Length=184, Percent_Identity=28.2608695652174, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24650670, Length=178, Percent_Identity=30.8988764044944, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 31617; Mature: 31617
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYPDEAMPYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQAL CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHCCCCCHHHHHHHH ADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPK HCCCCCCCCCEEEEECCCCCHHHCCCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHCCCH PVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKA HHHHHHHCCCCCCHHHHHHHHHHEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH REIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC DGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP CCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHCCCC >Mature Secondary Structure MIYPDEAMPYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQAL CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHCCCCCHHHHHHHH ADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPK HCCCCCCCCCEEEEECCCCCHHHCCCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHCCCH PVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKA HHHHHHHCCCCCCHHHHHHHHHHEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH REIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC DGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP CCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]