| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yehM
Identifier: 30063553
GI number: 30063553
Start: 2195887
End: 2198166
Strand: Direct
Name: yehM
Synonym: S2314
Alternate gene names: 30063553
Gene position: 2195887-2198166 (Clockwise)
Preceding gene: 30063552
Following gene: 30063554
Centisome position: 47.74
GC content: 55.13
Gene sequence:
>2280_bases ATGAGCGAGCCGTTAATTGTCGGCATCCGGCATCATAGTCCGGCCTGCGCCCGGCTGGTGAAATCGTTAATCGAAAGCCA GCGGCCACGATACGTGTTGATTGAAGGCCCTGCTGATTTTAATGACCGGGTAGACGAACTGTTTTTAGCCCACCAGCTTC CGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGTGCCTGGACGCCATTTGCTGAATTT TCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGTATTCAGGCACAAACTTACTTCATCGATTTGCCTTGCTGGGCGCA GAGTGAAGAAGAGGACGATTCGCCTGATACACAAGATGAAAGCCAGACCTTACTGCTGCGTGACACCCGCATGGATAACA GCGATACCCTGTGGGATCACTTATTCGAAGATGAAAGCCAGCAAACTGCATTACCCTCTGCACTGGCGCGCTATTTTGCC CAACTGCGGGGCGATTCCCCCGGAGATGCTCTCAATCGTCAGCGCGAAGCCTTTATGGCTCGCTGGATTACATGGGCGAT GCAGCAAAACAATGGCGACGTGTTAGTCGTCTGCGGCGGCTGGCACGCTCCTGCACTGGCAAACATGTGGCGCGAATGCC CGCAGGAAATTAACAAGCCAGAATTGTCCTCGCTGGCAGATGCCGTTACAGGTTGTTATCTCACACCCTACAGTGAAAAG CGCCTTGATGTGCTGGCAGGATACCTTTCAGGAATGCCTGCCCCGGTCTGGCAAAACTGGTGCTGGCAGTGGGGCTTACA GCAGGCGGGAGAACAACTGCTAAAAACGGTTCTCACCCGTTTGCGCCAGCACAAGTTGCCTGCTTCGACCGCGGATATGG CTGCCGCTCATCTGCATGCGATGGCACTGGCACAGTTGCGCGGTCATACACTACCGTTACGCACTGACTGGCTGGATGCC ATAGCAGGATCGCTGATTAAAGAAGCCCTGAATGCGCCGTTGCCGTGGAGCTATCGCGGCGTTATTCATCCCGATACCGA TCCGATTCTGCTAACGTTGATAGACACATTAGCGGGTGACGGATTCGGTAAACTTGCCCCTTCTACGCCACAACCGCCTC TGCCAAAAGATGTCACTTGCGAACTGGAACGTACCGCAATCTCTCTTCCGGCGGAGCTTACCTTAAATCGCTTTAACCCC AATGGACTAGCGCAAAGTCAGGTGTTACATCGGCTGGCAATACTGGAGATCCCAGGGATTGTACGCCAGCAGGGAAGCAC ACTGACACTTGCAGGCAACGGTGAAGAACGCTGGAAATTAACCCGCCCGCTTAGCCAGCATGCGGCATTGATTGAGGCCG CCTGCTTTGGTGCCACACTCCTGGAAGCCGCACGCCATAAATTAGAAGCCGATATGCTGGACGCGGGTGGAATCGGCAGC ATTACCACATGTCTTAGCCAAGCGGCGTCAGCGGGTCTGGCGTCCTTCAGTCAACAATTACTGGAGCAACTCACATTATT AATCGCCCAGGAAAATCAATTTGCCGAAATGGGCCAGGCGCTGGAAGTGCTATATGCCTTATGGCGGCTGGATGAAATTA GCGGTATGCAAGGCGCGCAGATATTACAAACGACGTTATGCGCGGCTATCGATCGCACGCTGTGGCTGTGTGAATCCAAC GGCAGACCGGATGAAAAGGAGTTTCACGCTCACTTGCATAGCTGGCAAGCGTTGTGTCATATCCTGCGCGATCTACATAG CGGTGTGCAACTCCCCGGCGTTTCGCTTTCTGCGGCGGTAGCCTTGCTGGAGCGACACAGTCAGGCGATTCATGTCCTGG CACTGGATCGCGGCGCGACTCTTGGTGCGCTGATGCGTCTGGAACATCCCAACGCTAGTGCCGAAGCGGCGCTGACGATG CTGGCGCAGTTATCCCCGGCACAATCCGGCGAGGCGCTGCACGGTTTGCTGGCATTAGCCCGTCATCAACTGGCCTGTCA GCCGGCATTTATCGCCGGTTTCAGCAGTCATTTAAATCAACTAAGTGATGCCGATTTTACCAATGCCCTGCCCGATTTAC GCGCGGCAATGGCCTGGCTACCGCCACGAGAACGCGGGACGCTGGCGCATCAGGTGCTTGAGCATTATCAACTGGCGCAA CTTCCCGTTTCAGCACTGCAAATGCCGTTGCATTGTCCACCGCAAGCCATTGCACATCATCAACAACTCGAACAGCAGGC ACTGGCATCGCTGCAACACTGGGGAGTTTTCCATGTCTGA
Upstream 100 bases:
>100_bases CGTCTGCGCCGTTACTTCGAACAGCGTGTCGCCACACATAAAGAAGCTCACTGGCAGGCTTATTATCAAGCCCGCCACCG CCTGCCGTGAGGAAAGATGC
Downstream 100 bases:
>100_bases ACTGAACGATCTTCTGACCACCCGTGAGCTACAACGCTGGCGATTAATTCTTGGCGAAGCGGCAGAAACGACGCTTTGTG GGCTGGATGACAACGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEF SPEWQALQAARRIQAQTYFIDLPCWAQSEEEDDSPDTQDESQTLLLRDTRMDNSDTLWDHLFEDESQQTALPSALARYFA QLRGDSPGDALNRQREAFMARWITWAMQQNNGDVLVVCGGWHAPALANMWRECPQEINKPELSSLADAVTGCYLTPYSEK RLDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDA IAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAELTLNRFNP NGLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEERWKLTRPLSQHAALIEAACFGATLLEAARHKLEADMLDAGGIGS ITTCLSQAASAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCAAIDRTLWLCESN GRPDEKEFHAHLHSWQALCHILRDLHSGVQLPGVSLSAAVALLERHSQAIHVLALDRGATLGALMRLEHPNASAEAALTM LAQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLSDADFTNALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQ LPVSALQMPLHCPPQAIAHHQQLEQQALASLQHWGVFHV
Sequences:
>Translated_759_residues MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEF SPEWQALQAARRIQAQTYFIDLPCWAQSEEEDDSPDTQDESQTLLLRDTRMDNSDTLWDHLFEDESQQTALPSALARYFA QLRGDSPGDALNRQREAFMARWITWAMQQNNGDVLVVCGGWHAPALANMWRECPQEINKPELSSLADAVTGCYLTPYSEK RLDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDA IAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAELTLNRFNP NGLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEERWKLTRPLSQHAALIEAACFGATLLEAARHKLEADMLDAGGIGS ITTCLSQAASAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCAAIDRTLWLCESN GRPDEKEFHAHLHSWQALCHILRDLHSGVQLPGVSLSAAVALLERHSQAIHVLALDRGATLGALMRLEHPNASAEAALTM LAQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLSDADFTNALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQ LPVSALQMPLHCPPQAIAHHQQLEQQALASLQHWGVFHV >Mature_758_residues SEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEFS PEWQALQAARRIQAQTYFIDLPCWAQSEEEDDSPDTQDESQTLLLRDTRMDNSDTLWDHLFEDESQQTALPSALARYFAQ LRGDSPGDALNRQREAFMARWITWAMQQNNGDVLVVCGGWHAPALANMWRECPQEINKPELSSLADAVTGCYLTPYSEKR LDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDAI AGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAELTLNRFNPN GLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEERWKLTRPLSQHAALIEAACFGATLLEAARHKLEADMLDAGGIGSI TTCLSQAASAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCAAIDRTLWLCESNG RPDEKEFHAHLHSWQALCHILRDLHSGVQLPGVSLSAAVALLERHSQAIHVLALDRGATLGALMRLEHPNASAEAALTML AQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLSDADFTNALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQL PVSALQMPLHCPPQAIAHHQQLEQQALASLQHWGVFHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788439, Length=759, Percent_Identity=96.7061923583663, Blast_Score=1437, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83547; Mature: 83416
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSY CCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH CQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDLPCWAQSEEEDDSPDTQDE HHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCC SQTLLLRDTRMDNSDTLWDHLFEDESQQTALPSALARYFAQLRGDSPGDALNRQREAFMA CCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RWITWAMQQNNGDVLVVCGGWHAPALANMWRECPQEINKPELSSLADAVTGCYLTPYSEK HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCCCHH RLDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGD HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC GFGKLAPSTPQPPLPKDVTCELERTAISLPAELTLNRFNPNGLAQSQVLHRLAILEIPGI CCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHHHCCHH VRQQGSTLTLAGNGEERWKLTRPLSQHAALIEAACFGATLLEAARHKLEADMLDAGGIGS HHCCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ITTCLSQAASAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWRLDEISGMQGAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ILQTTLCAAIDRTLWLCESNGRPDEKEFHAHLHSWQALCHILRDLHSGVQLPGVSLSAAV HHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ALLERHSQAIHVLALDRGATLGALMRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALA HHHHHCCCEEEEEEECCCCHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH RHQLACQPAFIAGFSSHLNQLSDADFTNALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQ HHHHHCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LPVSALQMPLHCPPQAIAHHQQLEQQALASLQHWGVFHV CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSY CCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH CQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDLPCWAQSEEEDDSPDTQDE HHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCC SQTLLLRDTRMDNSDTLWDHLFEDESQQTALPSALARYFAQLRGDSPGDALNRQREAFMA CCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RWITWAMQQNNGDVLVVCGGWHAPALANMWRECPQEINKPELSSLADAVTGCYLTPYSEK HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCCCHH RLDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGD HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC GFGKLAPSTPQPPLPKDVTCELERTAISLPAELTLNRFNPNGLAQSQVLHRLAILEIPGI CCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHHHCCHH VRQQGSTLTLAGNGEERWKLTRPLSQHAALIEAACFGATLLEAARHKLEADMLDAGGIGS HHCCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ITTCLSQAASAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWRLDEISGMQGAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ILQTTLCAAIDRTLWLCESNGRPDEKEFHAHLHSWQALCHILRDLHSGVQLPGVSLSAAV HHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ALLERHSQAIHVLALDRGATLGALMRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALA HHHHHCCCEEEEEEECCCCHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH RHQLACQPAFIAGFSSHLNQLSDADFTNALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQ HHHHHCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LPVSALQMPLHCPPQAIAHHQQLEQQALASLQHWGVFHV CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]