| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yegV [H]
Identifier: 30063539
GI number: 30063539
Start: 2168144
End: 2169109
Strand: Direct
Name: yegV [H]
Synonym: S2287
Alternate gene names: 30063539
Gene position: 2168144-2169109 (Clockwise)
Preceding gene: 30063528
Following gene: 30063551
Centisome position: 47.14
GC content: 56.0
Gene sequence:
>966_bases ATGAGCGGCGCTCGATTACACACACTGCTGCCTGAATTAACCACGCGTCAGCCGGTGATGGTCGTCGGCGCGGCGGTCAT TGACGTGATCGCCGACGCTTATGCCCTCCCCTGGCGTGGGTGCGATATCGAACTGAAACAGCAGAGCGTTAACGTTGGCG GCTGCGCACTGAATATTGCCGTGGCGTTAAAGCGCCTCGGCATCGAAGCGGGTAATGCCTTGCCGCTCGGTCAGGGCGTG TGGGCGGAGATTATTCGCAACCGGATGGCGAAAGAGGGGTTAATCAGCCTGATCGATAACGCCGAAAGCGATAACGGCTG GTGTCTGGCACTGGTTGAGCCGGATGGCGAACGCACTTTTATGTCATTCAGCGGTGTGGAAAATCAATGGAATCGCCAAT GGTTGGCACGATTAACCGTTGCGCCTGGCAACCTGCTCTATTTTTCCGGTTATCAACTGGCCTCGCCCTGCGGCGAATTG TTAGTGGAATGGCTGGAAAAGCTGCAAGACGTGACGCCGTTTATCGATTTTTGCCCACGTATTGGCGATATCCCGGACGC ATTACTGGCGCGGATCATGGCCTGTCGACCTTTAGTGTCACTCAATCGTCAAGAGGCTGAGATTGCCGCCGAACGTTTTG CTTTATCCGCAGAGATAACAACACTTGGCAAGCAATGGCAGGAGAAATTTGCCGCGCCGTTGATCGTTCGTCTCGATAAA GAAGGCGCATGGTATTTCAGCAACGACGCTTCTGGCTGCATTCCGGCATTTCCAACGCAAGTTGTAGACACCATTGGGGC GGGCGACAGTCATGCAGGTGGCGTACTTGCCGGGCTGGCCTCTGGTCTGCCACTGGCGGATGCCGTATTACTGGGCAATG CAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAAC GTATAG
Upstream 100 bases:
>100_bases TCGATCCTGCGTTAAAGGCGGAGCTGGATGCGGTAAATCAGCTTGATTTCAACCGCTATGCCACAGCGCTGGCGAAATAT CGTCAACAACGGGAGGCGGT
Downstream 100 bases:
>100_bases ATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCG GTATTTTGCTATCTAACTGA
Product: putative kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIELKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGV WAEIIRNRMAKEGLISLIDNAESDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGNLLYFSGYQLASPCGEL LVEWLEKLQDVTPFIDFCPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDK EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKN V
Sequences:
>Translated_321_residues MSGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIELKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGV WAEIIRNRMAKEGLISLIDNAESDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGNLLYFSGYQLASPCGEL LVEWLEKLQDVTPFIDFCPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDK EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKN V >Mature_320_residues SGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIELKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVW AEIIRNRMAKEGLISLIDNAESDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGNLLYFSGYQLASPCGELL VEWLEKLQDVTPFIDFCPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDKE GAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1788417, Length=321, Percent_Identity=98.1308411214953, Blast_Score=636, Evalue=0.0, Organism=Escherichia coli, GI1788493, Length=247, Percent_Identity=27.9352226720648, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 34480; Mature: 34349
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIELKQQSVNVGGCALNIA CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHH VALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAESDNGWCLALVEPDGERTF HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE MSFSGVENQWNRQWLARLTVAPGNLLYFSGYQLASPCGELLVEWLEKLQDVTPFIDFCPR EEECCCCCHHHHHHHHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCC IGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDK CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNAVASWVV CCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH GHRGGDCAPTREELLLAHKNV CCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure SGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIELKQQSVNVGGCALNIA CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHH VALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAESDNGWCLALVEPDGERTF HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE MSFSGVENQWNRQWLARLTVAPGNLLYFSGYQLASPCGELLVEWLEKLQDVTPFIDFCPR EEECCCCCHHHHHHHHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCC IGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDK CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNAVASWVV CCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH GHRGGDCAPTREELLLAHKNV CCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]