| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063451
Identifier: 30063451
GI number: 30063451
Start: 2063428
End: 2063640
Strand: Direct
Name: 30063451
Synonym: S2180
Alternate gene names: NA
Gene position: 2063428-2063640 (Clockwise)
Preceding gene: 30063450
Following gene: 30063454
Centisome position: 44.86
GC content: 52.58
Gene sequence:
>213_bases ATGATAACGCTGCCGACCGGTACCAAAATCTGGATCATCGCTGGCATCACAGATATGCGTTGTGGCTTCAATGGCCTGGC TTCGAAGGTGCAGAACACGCTGAAAGATGACCCGTTCTCCGGGCATATCTTCGTCTTCCGGGGCCGCAGTGGCAAAATGG TGAAAATACTGTGTGAACCGCCCCGGGTTTCCTGGAGAGTGTTTTATCTGTGA
Upstream 100 bases:
>100_bases GGTGCGAGCTGCATCTTAAATCAGGTGTGGTAAAACTGTTTGACCCTCTCACTCCGGAACTGTTACGGGCGCTAATCCGC GAAATGAAAGGGGGTATCCG
Downstream 100 bases:
>100_bases ACTCAGGCTGCCAGATCATCGTTTCCGATGGAAGCATAATAAGCTTTTTCTGCTTCTGCCGGAGGGATGTGGCCCAGCCT TTCCAGCAATCGTCGATTGT
Product: ISSfl3 orfB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILCEPPRVSWRVFYL
Sequences:
>Translated_70_residues MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILCEPPRVSWRVFYL >Mature_70_residues MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILCEPPRVSWRVFYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 34 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008878 [H]
Pfam domain/function: PF05717 Transposase_34 [H]
EC number: NA
Molecular weight: Translated: 7917; Mature: 7917
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILCEP CEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECC PRVSWRVFYL CCCCEEEEEC >Mature Secondary Structure MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILCEP CEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECC PRVSWRVFYL CCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]