Click here to switch to the map view.

The map label for this gene is fliH

Identifier: 30063380

GI number: 30063380

Start: 1992490

End: 1993176

Strand: Direct

Name: fliH

Synonym: S2079

Alternate gene names: 30063380

Gene position: 1992490-1993176 (Clockwise)

Preceding gene: 30063379

Following gene: 30063381

Centisome position: 43.32

GC content: 57.21

Gene sequence:

>687_bases
ATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACCGGCAGAGTTTGTGCCAATGGTCGA
GTCGGAAGAAACCATTATTGAAGAGGCCGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCAAATGCAGGCCCACGAGC
AGGGTTATCAGGCGGGGATTGCCGAAGGTCGCCAGCAAGGTCACGAACAGGGCTATCAGGAAGGACTGGCCCAGGGGCTG
GAACAAGGTCTGGCAGAGGCGAAGGCTCAACAAGCGCCAATTCATGCCCGGATGCAGCAACTGGTCAGCGAATTTCAAAC
TACCCTTGATGCGCTTGATAGTGTGATAGCTTCGCGCCTGATGCAGATGGCGCTGGAGGCAGCACGTCAGGTGATCGGTC
AGACACCAACGGTGGATAACTCGGCACTGATCAAACAGATCCAACAGTTGTTGCAGCAAGAACCGTTATTCAGCGGGAAA
CCACAGCTGCGCGTACACCCGGATGATCTGCAACGTGTGGATGATATGCTCGGCGCAACTTTAAGTTTGCATGGCTGGCG
CTTGCGGGGCGATCCCACCCTCCACCCTGGCGGATGTAAAGTCTCCGCCGATGAAGGCGATCTCGACGCCAGTGTCGCCA
CTCGCTGGCAAGAACTCTGCCGTCTGGCAGCACCAGGAGTGGTGTAA

Upstream 100 bases:

>100_bases
CGTCTGTCGCAGGTCGAAAACGAACAGAAAGCGATTCTGCTGATTGTGCGCCGTCTTGCCGAAACTGGCGAGATGGTGAT
TGGCAGCGGCGAGGATACCT

Downstream 100 bases:

>100_bases
TGACCACGCGCCTGACTCGCTGGCTAACCACGCTGGATAACTTTGAAGCCAAAATGGCGCAGTTGCCTGCGGTACGTCGC
TACGGGCGATTAACCCGCGC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGIAEGRQQGHEQGYQEGLAQGL
EQGLAEAKAQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK
PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV

Sequences:

>Translated_228_residues
MSDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGIAEGRQQGHEQGYQEGLAQGL
EQGLAEAKAQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK
PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
>Mature_227_residues
SDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGIAEGRQQGHEQGYQEGLAQGLE
QGLAEAKAQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKP
QLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=228, Percent_Identity=97.8070175438597, Blast_Score=405, Evalue=1e-114,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 25012; Mature: 24881

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGI
CCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AEGRQQGHEQGYQEGLAQGLEQGLAEAKAQQAPIHARMQQLVSEFQTTLDALDSVIASRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGAT
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHH
LSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
HHHCCEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGI
CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AEGRQQGHEQGYQEGLAQGLEQGLAEAKAQQAPIHARMQQLVSEFQTTLDALDSVIASRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGAT
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHH
LSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
HHHCCEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8224881 [H]