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The map label for this gene is nmpC

Identifier: 30063374

GI number: 30063374

Start: 1985546

End: 1986628

Strand: Direct

Name: nmpC

Synonym: S2073

Alternate gene names: 30063374

Gene position: 1985546-1986628 (Clockwise)

Preceding gene: 30063372

Following gene: 30063379

Centisome position: 43.17

GC content: 44.14

Gene sequence:

>1083_bases
ATGAAAAAATTAACAGTGGCAATTTCTGCTGTAGCTGCATCAGTACTGATGGCGATGTCTGCTCAGGCAGCAGAGATTTA
CAATAAAGACAGTAACAAGCTGGATCTGTACGGAAAAGTTAATGCTAAGCACTACTTCTCTTCTAACGATGCAGATGATG
GCGACACAACTTATGTTCGTCTGGGCTTCAAAGGCGAAACTCAAATCAACGATCAACTGACTGGTTTCGGTCAGTGGGAA
TATGAATTCAAAGGCAACCGTGCTGAATCTCAAGGTTCTTCCAAAGATAAAACCCGTCTTGCCTTCGCTGGCCTGAAATT
CGGTGACTACGGCTCCATCGATTATGGCCGTAACTACGGTGTAGCATACGATATCGGTGCATGGACCGACGTTCTGCCAG
AATTCGGTGGCGATACCTGGACCCAAACAGATGTGTTCATGACTGGTCGCACCACAGGTGTTGCAACCTATCGTAACAAC
GACTTCTTTGGTCTGGTTGATGGTCTGAACTTTGCTGCTCAGTATCAGGGTAAAAATGACCGCACTGACGTAACTGAAGC
TAACGGTGATGGTTTCGGTTTCTCCACTACTTATGAGTATGAAGGATTCGGTGTAGGTGCAACCTATGCTAAATCTGACC
GCACTAATGATCAGGTTATCTACGGTAACAACAGCCTGAATGCATCTGGTCAAAATGCTGAAGTATGGGCAGCTGGTCTG
AAATATGATGCGAACAACATCTATCTGGCTACCACCTATTCTGAAACCCAGAACATGACTGTTTTTGGTAATAACCATAT
TGCCAACAAAGCACAAAACTTCGAAGTAGTTGCACAATATCAGTTCGACTTCGGTCTGCGTCCGTCCGTTGCTTACCTGC
AATCTAAAGGAAAAGACTTGGGTGCGTGGGGTGATCAGGACCTGATTGAATATATTGATGTAGGTGCAACCTATTACTTC
AACAAAAATATGTCCACTTTTGTTGATTACAAAATCAACCTGATTGATAAGAGCGATTTCACGAAAGCATCTGGCGTTGC
TACCGATGATATCGTTGCTGTAGGATTGGTTTACCAGTTCTAA

Upstream 100 bases:

>100_bases
AAACTAAAACTTACATCTTGAAATAATCTCATTGATTGGATGAATATTTGTAGTGCAGTGACATCATTTTTAAATAATAG
TTCAAATAAAAGGGCTCACG

Downstream 100 bases:

>100_bases
TCTGATTACTCAAAGATATGTTGTGGGAGGCTTTGCCTCCCCAACATATAAGTGGCGCTCTCAAGCCACTTTCCTTAGAA
GCACTATCTTGCTTCTGACT

Product: putative outer membrane porin protein C precurser

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQWE
YEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNN
DFFGLVDGLNFAAQYQGKNDRTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGL
KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLGAWGDQDLIEYIDVGATYYF
NKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGLVYQF

Sequences:

>Translated_360_residues
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQWE
YEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNN
DFFGLVDGLNFAAQYQGKNDRTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGL
KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLGAWGDQDLIEYIDVGATYYF
NKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGLVYQF
>Mature_360_residues
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQWE
YEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNN
DFFGLVDGLNFAAQYQGKNDRTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGL
KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLGAWGDQDLIEYIDVGATYYF
NKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGLVYQF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein. Note=When expressed in mutant CS384 [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Gram-negative porin family [H]

Homologues:

Organism=Escherichia coli, GI1787641, Length=360, Percent_Identity=65, Blast_Score=443, Evalue=1e-126,
Organism=Escherichia coli, GI1786436, Length=362, Percent_Identity=61.878453038674, Blast_Score=434, Evalue=1e-123,
Organism=Escherichia coli, GI1788544, Length=369, Percent_Identity=60.9756097560976, Blast_Score=426, Evalue=1e-121,
Organism=Escherichia coli, GI1787160, Length=371, Percent_Identity=57.9514824797844, Blast_Score=396, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001897
- InterPro:   IPR013793
- InterPro:   IPR001702 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39653; Mature: 39653

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00576 GRAM_NEG_PORIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVR
CCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEECCCCCCCCCEEEEE
LGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYG
EEECCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCC
VAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKND
EEEECCCHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCEEEEECCCCC
RTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGL
CCCCEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEE
KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDL
EECCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCC
GAWGDQDLIEYIDVGATYYFNKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGLVYQF
CCCCCHHHHHHHHCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVR
CCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEECCCCCCCCCEEEEE
LGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYG
EEECCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCC
VAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKND
EEEECCCHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCEEEEECCCCC
RTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGL
CCCCEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEE
KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDL
EECCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCC
GAWGDQDLIEYIDVGATYYFNKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGLVYQF
CCCCCHHHHHHHHCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3017988; 9278503; 8057841; 8648624 [H]