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The map label for this gene is fliC

Identifier: 30063365

GI number: 30063365

Start: 1974756

End: 1976408

Strand: Reverse

Name: fliC

Synonym: S2062

Alternate gene names: 30063365

Gene position: 1976408-1974756 (Counterclockwise)

Preceding gene: 30063370

Following gene: 30063364

Centisome position: 42.97

GC content: 48.22

Gene sequence:

>1653_bases
ATGGCACAAGTCATTAATACCAACAGCCTCTCGCTGATCACTCAAAATAATATCAACAAGAACCAGTCTGCGCTGTCGAG
TTCTATCGAGCGTCTGTCTTCTGGCTTGCGTATTAACAGCGCGAAGGATGACGCCGCGGGTCAGGCGATTGCTAACCGTT
TTACTTCTAACATTAAAGGCCTGACTCAGGCTGCACGTAACGCCAACGACGGTATTTCTGTTGCACAGACCACTGAAGGC
GCGCTGTCCGAAATCAACAACAACTTACAGCGTATCCGTGAGCTGACGGTTCAGGCTTCTACCGGGACTAACTCTGATTC
GGATCTGGACTCCATTCAGGACGAAATCAAATCCCGTCTCGACGAAATTGACCGCGTATCCGGTCAGACCCAGTTCAACG
GCGTGAACGTACTGGCAAAAGACGGTTCGATGAAAATTCAGGTTGGTGCGAATGACGGCCAGACTATCACTATTGATCTG
AAGAAAATTGACTCTGATACGCTGGGGCTGAATGGGTTTAATGTGAATGGTGGCGGGGCTGTGGCTAATACTGCTGCATC
TAAAGCTGACTTGGTAGCTGCTAATGCAACAGTGGTCGGCAACAAATATACTGTGAGTGCGGGTTACGATGCTGCTAAAG
CGTCTGATTTGCTGGCTGGAGTTAGTGATGGTGATACTGTTCAGGCAACCATTAATAACGGCTTCGGAACGGCGGCTAGT
GCAACGAATTACAAGTATGACAGTGCAAGTAAGTCATACTCTTTTGATACCACAACGGCTTCAGCTGCCGATGTTCAGAA
ATATTTGACCCCGGGAGTTGGTGATACCGCTAAGGGCACTATTACTATCGATGGTTCTGCACAGGATGTTCAGATCAGCA
GTGATGGTAAAATTACGGCAAGCAATGGAGATAAACTCTACATTGATACAACTGGGCGCTTAACGAAAAACGGCTCTGGT
GCTTCTTTGACTGAGGCTAGTCTGTCCACACTTGCAGCCAATAATACCAAAGCGACAACCATTGACATTGGCGGTACCTC
TATCTCCTTTACCGGTAATAGTACTACGCCGGACACTATTACTTATTCAGTAACAGGTGCAAAAGTTGATCAGGCAGCTT
TCGATAAAGCTGTATCAACCTCGGGAAACAATGTTGATTTCACTACTGCAGGTTATAGCGTCAACGGCACAACTGGCGCT
GTAACAAAAGGTGTTGATTCGGTTTATGTTGATAACAACGAGGCGTTGACCACATCTGATACTGTAGATTTTTACCTACA
GGATGATGGTTCAGTGACTAACGGCAGCGGTAAGGCAGTTTATAAAGATGCTGATGGTAAATTGACGACAGATGCTGAAA
CAAAAGCAGCTACGACAGCCGATCCCCTGAAAGCTCTGGATGAAGCCATCAGCTCCATCGACAAATTCCGCTCCTCCCTG
GGTGCGGTGCAAAACCGTTTGGATTCCGCAGTCACCAACCTGAACAACACCACTACCAACCTGTCTGAAGCGCAGTCCCG
TATTCAGGACGCCGACTATGCGACCGAAGTGTCCAACATGTCGAAAGCGCAGATTATCCAGCAGGCCGGTAACTCCGTGC
TGGCAAAAGCCAACCAGGTACCGCAGCAGGTTCTGTCTCTGCTGCAGGGTTAA

Upstream 100 bases:

>100_bases
AGGTTGTTTTACGACAGACGATAACAGGGTTGACGGCGATTGAGCCGACGGGTGGAAACCCAAAACGTAATCAACGACTT
GCAATATAGGATAACGAATC

Downstream 100 bases:

>100_bases
TCGTCTGAATGCCTCTCAAACCCCGCCACCGGCGGGGTTTTTTACATTCGGCTTTTTGCGTAACCCCCAAATAACCCCTC
ATTTCACCCACTAATCGTCC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 549

Protein sequence:

>550_residues
MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG
ALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDL
KKIDSDTLGLNGFNVNGGGAVANTAASKADLVAANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAAS
ATNYKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNGDKLYIDTTGRLTKNGSG
ASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTITYSVTGAKVDQAAFDKAVSTSGNNVDFTTAGYSVNGTTGA
VTKGVDSVYVDNNEALTTSDTVDFYLQDDGSVTNGSGKAVYKDADGKLTTDAETKAATTADPLKALDEAISSIDKFRSSL
GAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG

Sequences:

>Translated_550_residues
MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG
ALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDL
KKIDSDTLGLNGFNVNGGGAVANTAASKADLVAANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAAS
ATNYKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNGDKLYIDTTGRLTKNGSG
ASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTITYSVTGAKVDQAAFDKAVSTSGNNVDFTTAGYSVNGTTGA
VTKGVDSVYVDNNEALTTSDTVDFYLQDDGSVTNGSGKAVYKDADGKLTTDAETKAATTADPLKALDEAISSIDKFRSSL
GAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG
>Mature_549_residues
AQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGA
LSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLK
KIDSDTLGLNGFNVNGGGAVANTAASKADLVAANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAASA
TNYKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNGDKLYIDTTGRLTKNGSGA
SLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTITYSVTGAKVDQAAFDKAVSTSGNNVDFTTAGYSVNGTTGAV
TKGVDSVYVDNNEALTTSDTVDFYLQDDGSVTNGSGKAVYKDADGKLTTDAETKAATTADPLKALDEAISSIDKFRSSLG
AVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family

Homologues:

Organism=Escherichia coli, GI1788232, Length=175, Percent_Identity=93.7142857142857, Blast_Score=325, Evalue=4e-90,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): FLIC_SHIFL (Q08860)

Other databases:

- EMBL:   D16819
- EMBL:   AE005674
- EMBL:   AE014073
- PIR:   S44980
- RefSeq:   NP_707809.1
- RefSeq:   NP_837536.1
- ProteinModelPortal:   Q08860
- EnsemblBacteria:   EBESCT00000087033
- EnsemblBacteria:   EBESCT00000090390
- GeneID:   1025169
- GeneID:   1078378
- GenomeReviews:   AE005674_GR
- GenomeReviews:   AE014073_GR
- KEGG:   sfl:SF1966
- KEGG:   sfx:S2062
- GeneTree:   EBGT00050000008361
- HOGENOM:   HBG758847
- OMA:   NSNELDK
- ProtClustDB:   PRK08026
- BioCyc:   SFLE198214:AAN43516.1-MONOMER
- InterPro:   IPR001492
- InterPro:   IPR001029
- PRINTS:   PR00207

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N

EC number: NA

Molecular weight: Translated: 56637; Mature: 56506

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG
CCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRL
HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHH
DEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGGGA
HHHHHHCCCCEECCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEECCCCCC
VANTAASKADLVAANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAAS
CCCCCCCCCCEEEECEEEECCEEEEECCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCC
ATNYKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCEEEE
SNGDKLYIDTTGRLTKNGSGASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTI
CCCCEEEEECCCCEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCCCCEE
TYSVTGAKVDQAAFDKAVSTSGNNVDFTTAGYSVNGTTGAVTKGVDSVYVDNNEALTTSD
EEEEECCCHHHHHHHHHHCCCCCCEEEEECCEEECCCCCHHHCCCCEEEECCCCEEEECC
TVDFYLQDDGSVTNGSGKAVYKDADGKLTTDAETKAATTADPLKALDEAISSIDKFRSSL
CEEEEECCCCCEECCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQV
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
PQQVLSLLQG
HHHHHHHHCC
>Mature Secondary Structure 
AQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG
CEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRL
HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHH
DEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGGGA
HHHHHHCCCCEECCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEECCCCCC
VANTAASKADLVAANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAAS
CCCCCCCCCCEEEECEEEECCEEEEECCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCC
ATNYKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCEEEE
SNGDKLYIDTTGRLTKNGSGASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTI
CCCCEEEEECCCCEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCCCCEE
TYSVTGAKVDQAAFDKAVSTSGNNVDFTTAGYSVNGTTGAVTKGVDSVYVDNNEALTTSD
EEEEECCCHHHHHHHHHHCCCCCCEEEEECCEEECCCCCHHHCCCCEEEECCCCEEEECC
TVDFYLQDDGSVTNGSGKAVYKDADGKLTTDAETKAATTADPLKALDEAISSIDKFRSSL
CEEEEECCCCCEECCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQV
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
PQQVLSLLQG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8057852; 12384590; 12704152