Click here to switch to the map view.

The map label for this gene is ydcX [H]

Identifier: 30063244

GI number: 30063244

Start: 1845983

End: 1846231

Strand: Reverse

Name: ydcX [H]

Synonym: S1904

Alternate gene names: 30063244

Gene position: 1846231-1845983 (Counterclockwise)

Preceding gene: 30063245

Following gene: 30063243

Centisome position: 40.14

GC content: 44.58

Gene sequence:

>249_bases
GTGAAAAAACTTGATGCACGTCAAAAAATGGCGCATATTTGCGCGCGTTTTATTCATATGGCTGGACGCCCGTACATGTT
TCTCTATCAACATATGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATA
AGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCCACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCA
CTGTTTTAA

Upstream 100 bases:

>100_bases
TGCCCCTATGTGTATAGTACGGGTTAAGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTT
GATGATTTTTTCTCAAACTG

Downstream 100 bases:

>100_bases
ATCTTACTCACTGGCTTGACGGCACCACGCAGACTTATATCATTTGGATTAATCGATAAATTTCACAAGTGGCTAAGGAG
AAAGTATGTCGCATCTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKKLDARQKMAHICARFIHMAGRPYMFLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATWPMSFPVALLFS
LF

Sequences:

>Translated_82_residues
MKKLDARQKMAHICARFIHMAGRPYMFLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATWPMSFPVALLFS
LF
>Mature_82_residues
MKKLDARQKMAHICARFIHMAGRPYMFLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATWPMSFPVALLFS
LF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjdO [H]

Homologues:

Organism=Escherichia coli, GI87081912, Length=57, Percent_Identity=98.2456140350877, Blast_Score=110, Evalue=2e-26,
Organism=Escherichia coli, GI87082373, Length=57, Percent_Identity=63.1578947368421, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019689 [H]

Pfam domain/function: PF10753 DUF2566 [H]

EC number: NA

Molecular weight: Translated: 9662; Mature: 9662

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
8.5 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
8.5 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLDARQKMAHICARFIHMAGRPYMFLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFL
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SAFLVGATWPMSFPVALLFSLF
HHHHHHHCCCHHHHHHHHHHHC
>Mature Secondary Structure
MKKLDARQKMAHICARFIHMAGRPYMFLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFL
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SAFLVGATWPMSFPVALLFSLF
HHHHHHHCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]