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The map label for this gene is ynhG

Identifier: 30063192

GI number: 30063192

Start: 1777593

End: 1778597

Strand: Reverse

Name: ynhG

Synonym: S1840

Alternate gene names: 30063192

Gene position: 1778597-1777593 (Counterclockwise)

Preceding gene: 30063193

Following gene: 30063187

Centisome position: 38.67

GC content: 51.54

Gene sequence:

>1005_bases
ATGAAACGCGCGTCTTTGCTTACACTCACGCTTATCGGCGCTTTTAGCGCCATCCAGGCTGCCTGGGCGGTTGATTATCC
GCTACCACCAACCGGAAGCCGACTGGTTGGGCAAAATCAAACGTATACGGTGCAAGAAGGGGATAAAAACCTTCAGGCTA
TTGCCCGACGTTTTGATACTGCAGCAATGTTGATCCTTGAAGCCAATAACACTATCGCCCCGGTGCCAAAACCTGGTACG
ACGATAACTATTCCTTCACAACTGTTATTACCTGATGCACCGCGTCAGGGGATTATCGTTAACCTTGCAGAGCTGCGCCT
TTATTATTATCCGCCGGGAGAAAATATTGTGCAGGTTTATCCAATAGGTATTGGATTGCAGGGGCTGGAAACGCCGGTGA
TGGAAACGCGTGTTGGGCAGAAAATCCCTAACCCAACCTGGACGCCTACGGCAGGCATTCGTCAGCGTTCGCTGGAGCGT
GGCATTAAATTACCGCCAGTCGTTCCTGCCGGACCAAATAACCCGCTAGGACGTTACGCACTGCGCCTCGCGCATGGTAA
TGGCGAATACCTCATTCATGGCACCAGTGCGCCGGACAGCGTTGGTTTGCGCGTCAGTTCAGGGTGTATTCGCATGAATG
CACCGGATATTAAAGCCTTGTTCTCCAGCGTGCGGACGGGAACGCCGGTGAAAGTGATCAACGAACCGGTGAAATATTCC
GTGGAACCTAACGGGATGCGTTATGTTGAAGTACATCGACCACTATCAGCAGAAGAACAGCAAAACGTTCAGACAATGCC
ATACACACTGCCAGCAGGCTTTACGCAATTTAAAGACAATAAGGCTGTAGATCAGAAGTTAGTCGATAAAGCGTTGTATC
GTCGGGCAGGGTATCCGGTTTCGGTGAGCAGTGGAGCAACTCCCGCAGCCAGCAATGCGCCTTCAGTAGAGTCAGCGCAG
AATGGTGAACCAGAGCAAGGGAATATGTTACGCGCGACGCAGTAG

Upstream 100 bases:

>100_bases
ATGTTTACACTGACCGGCACAGGAGTGTTTTGGTTTCAGGTGAACATAAGCACCATCCGACGTTTCAGCGTGAGTCTCCG
GCAAATACAGGAGGTTTACA

Downstream 100 bases:

>100_bases
TGGTAAATAGCAGACAAAAAAATGGCGCACAATGTGCGCCATTTTTCACTTCACAGGTACTATTACTTGCGGTATTTAGT
AGCCATGTTGTCCAGACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
TITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQ
NGEPEQGNMLRATQ

Sequences:

>Translated_334_residues
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
TITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQ
NGEPEQGNMLRATQ
>Mature_334_residues
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
TITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQ
NGEPEQGNMLRATQ

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=334, Percent_Identity=99.7005988023952, Blast_Score=674, Evalue=0.0,
Organism=Escherichia coli, GI1787356, Length=280, Percent_Identity=52.5, Blast_Score=291, Evalue=4e-80,
Organism=Escherichia coli, GI1788299, Length=311, Percent_Identity=45.3376205787781, Blast_Score=246, Evalue=1e-66,
Organism=Escherichia coli, GI1787040, Length=305, Percent_Identity=45.5737704918033, Blast_Score=240, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 36055; Mature: 36055

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDT
CCCHHEEHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC
AAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVY
EEEEEEECCCEECCCCCCCCEEEECCCEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEE
PIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA
EECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
EEEEECCCCEEEECCCCCCCCCEEEECCEEEECCCHHHHHHHHHCCCCCHHEECCCEEEE
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPV
ECCCCEEEEEECCCCCCHHHCCCEECCEECCCCCHHCCCCHHHHHHHHHHHHHHHCCCCE
SVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ
EECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDT
CCCHHEEHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC
AAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVY
EEEEEEECCCEECCCCCCCCEEEECCCEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEE
PIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA
EECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
EEEEECCCCEEEECCCCCCCCCEEEECCEEEECCCHHHHHHHHHCCCCCHHEECCCEEEE
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPV
ECCCCEEEEEECCCCCCHHHCCCEECCEECCCCCHHCCCCHHHHHHHHHHHHHHHCCCCE
SVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ
EECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]