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The map label for this gene is ydhA

Identifier: 30063154

GI number: 30063154

Start: 1734422

End: 1734670

Strand: Reverse

Name: ydhA

Synonym: S1796

Alternate gene names: 30063154

Gene position: 1734670-1734422 (Counterclockwise)

Preceding gene: 161486481

Following gene: 30063153

Centisome position: 37.72

GC content: 46.99

Gene sequence:

>249_bases
ATGCAAACCGATACGCTGGAATACCAGTGTGATGAAAAACCGTTGACGGTCAAACTGAATAATCCGCGCCAGGAAGTCAG
TTTTGTTTACGATAATCAACTACTGCATCTCAAACAGGGCCTTTCAGCCTCTGGCGCGCGTTACTCCGACGGGATCTATG
TTTTCTGGTCGAAAGGTGAGGAAGCGACTGTCTATAAACGCGACCGCATCGTCTTGAATAACTGTCAGTTACAAAATCCA
CAGCGTTGA

Upstream 100 bases:

>100_bases
GGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGG
GGCAAATCCAGGTTGAGCGA

Downstream 100 bases:

>100_bases
GATTTTTCCAGGGGCGGCGCACAATAGCGTCACCCACTGACAATCCGTAAAGAAAACCATGTCTGATAACGACGAATTGC
AGCAAATCGCGCATCTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGLSASGARYSDGIYVFWSKGEEATVYKRDRIVLNNCQLQNP
QR

Sequences:

>Translated_82_residues
MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGLSASGARYSDGIYVFWSKGEEATVYKRDRIVLNNCQLQNP
QR
>Mature_82_residues
MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGLSASGARYSDGIYVFWSKGEEATVYKRDRIVLNNCQLQNP
QR

Specific function: Specifically inhibits C-type lysozymes [H]

COG id: COG3895

COG function: function code R; Predicted periplasmic protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Note=Anchored to the periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mliC family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081949, Length=82, Percent_Identity=96.3414634146341, Blast_Score=171, Evalue=8e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018660 [H]

Pfam domain/function: PF09864 DUF2091 [H]

EC number: NA

Molecular weight: Translated: 9554; Mature: 9554

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGLSASGARYSDGIYVFWSKGE
CCCCCCEEEECCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCEECCCEEEEECCCC
EATVYKRDRIVLNNCQLQNPQR
CEEEEECCEEEEECCCCCCCCC
>Mature Secondary Structure
MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGLSASGARYSDGIYVFWSKGE
CCCCCCEEEECCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCEECCCEEEEECCCC
EATVYKRDRIVLNNCQLQNPQR
CEEEEECCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1356963 [H]