| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yniA [H]
Identifier: 30063008
GI number: 30063008
Start: 1576520
End: 1577380
Strand: Reverse
Name: yniA [H]
Synonym: S1622
Alternate gene names: 30063008
Gene position: 1577380-1576520 (Counterclockwise)
Preceding gene: 30063009
Following gene: 30063006
Centisome position: 34.3
GC content: 51.92
Gene sequence:
>861_bases ATGTGGCAGGCAATCAGTCGTCTTTTGAGCGAGCAGTTAGGTGAAGGCGAAATCGAACTGCGTAATGAACTGCCTGGCGG AGAAGTCCATGCCGCATGGCATTTGCGCTATGCAGGACATGACTTTTTCGTCAAATGTGATGAAAGGGAACTGCTTCCCG GTTTTACCGCCGAAGCCGACCAACTGGAGTTACTGTCGCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTAGGC GCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGG TCAGCAAATTGCGCGTTTACATCAATGGAGTGACCAACCACAATTTGGCCTCGATTTTGATAACTCGCTCTCCACAACTC CACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCAGCA GAGAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCGCATCAACCGCAGCC TTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCGCTGGGTCCGGATGGCCCGTACATTTTCGACCCTGCCTGCG ACTGGGGTGACCGAGAGTGCGACCTAGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAG TCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGATT ATTTGGCGGTCAGCATTTGGTTATTGCTCAGCAGTCATTGGATAGATTATTAGCAGCATGA
Upstream 100 bases:
>100_bases TTTTGGGCAATAATCAGTCTGTGGTGTGCGTTAGCTCGTGTTTTTACACCGCATTCTTGCGCTAACCTTATGATCTGGCA GACAACATGGGAGAGACATC
Downstream 100 bases:
>100_bases TATGGGTTGAGGATAATGGCCGCTCCGTGCGGCCTTTTGATTAAATAAACCCAAGCAGAGAAAAGAACACATAACCTGCA GCAATACAAATAACCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVG ADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACDWGDRECDLAMLPLHTEQPPQIYDGYQ SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA
Sequences:
>Translated_286_residues MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVG ADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACDWGDRECDLAMLPLHTEQPPQIYDGYQ SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA >Mature_286_residues MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVG ADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACDWGDRECDLAMLPLHTEQPPQIYDGYQ SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA
Specific function: Unknown
COG id: COG3001
COG function: function code G; Fructosamine-3-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fructosamine kinase family [H]
Homologues:
Organism=Homo sapiens, GI20149680, Length=294, Percent_Identity=28.9115646258503, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI11545906, Length=272, Percent_Identity=29.7794117647059, Blast_Score=96, Evalue=3e-20, Organism=Escherichia coli, GI1788019, Length=286, Percent_Identity=99.3006993006993, Blast_Score=582, Evalue=1e-167,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016477 - InterPro: IPR011009 [H]
Pfam domain/function: PF03881 Fructosamin_kin [H]
EC number: NA
Molecular weight: Translated: 32427; Mature: 32427
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEAD CHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCHH QLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQP HHHHHHCCCEEECCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC QFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHCCCCCCCHHHHHHHHHHHH ASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACDWGDRECDLAMLPLHTEQPPQIYDGYQ HHCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCHHHCCHH SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA HCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCC >Mature Secondary Structure MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEAD CHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCHH QLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQP HHHHHHCCCEEECCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC QFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHCCCCCCCHHHHHHHHHHHH ASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACDWGDRECDLAMLPLHTEQPPQIYDGYQ HHCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCHHHCCHH SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA HCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]