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The map label for this gene is ydjM

Identifier: 30063005

GI number: 30063005

Start: 1574375

End: 1574965

Strand: Reverse

Name: ydjM

Synonym: S1619

Alternate gene names: 30063005

Gene position: 1574965-1574375 (Counterclockwise)

Preceding gene: 30063006

Following gene: 30063004

Centisome position: 34.24

GC content: 51.27

Gene sequence:

>591_bases
ATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGC
ACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTC
TTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCG
GTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGT
GCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTT
TCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTGGAACGTTTTATCTGCATGGCATTATTTGTCTGGTCGGTA
TGGATGCCCCATTCATTACCCGAGAACAGCGCTGTTCGTTGGTCATCGCAAATGATCAATACCTTGCAGATCCAGTTTCA
TCGGCTTATTAAGCATCAGGTTGAATACTAA

Upstream 100 bases:

>100_bases
ATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTCCGTGCACTGTATAAAAATCCTATACTGTACGTATCG
ACAGTTTAGTGAGTTTTATC

Downstream 100 bases:

>100_bases
AAAGGCAAAAATCACCTTTCTGGAATAAGCAATTCCATTTGAATATAAGAGCCAGCTCACAGTTCTGTTAATCTTGCGCC
AACACTATGACTGCTACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLA
VFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
WMPHSLPENSAVRWSSQMINTLQIQFHRLIKHQVEY

Sequences:

>Translated_196_residues
MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLA
VFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
WMPHSLPENSAVRWSSQMINTLQIQFHRLIKHQVEY
>Mature_195_residues
TAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAV
FALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVW
MPHSLPENSAVRWSSQMINTLQIQFHRLIKHQVEY

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yvsG

Homologues:

Organism=Escherichia coli, GI226510947, Length=196, Percent_Identity=100, Blast_Score=401, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDJM_ECOLI (P64481)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   H64931
- RefSeq:   AP_002347.1
- RefSeq:   NP_416242.6
- STRING:   P64481
- EnsemblBacteria:   EBESCT00000003778
- EnsemblBacteria:   EBESCT00000017566
- GeneID:   945644
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5281
- KEGG:   eco:b1728
- EchoBASE:   EB3745
- EcoGene:   EG13989
- eggNOG:   COG1988
- GeneTree:   EBGT00050000010585
- HOGENOM:   HBG668241
- ProtClustDB:   PRK11648
- BioCyc:   EcoCyc:G6933-MONOMER
- Genevestigator:   P64481
- InterPro:   IPR007404
- InterPro:   IPR016956
- PIRSF:   PIRSF030780

Pfam domain/function: PF04307 DUF457

EC number: NA

Molecular weight: Translated: 22351; Mature: 22220

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1290d260)-; HASH(0x1293553c)-; HASH(0x124b6c9c)-; HASH(0x12a6854c)-;

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKW
CCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHC
PAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVWMPHSLPENSAVRWSSQMIN
CCCCCEEECCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TLQIQFHRLIKHQVEY
HHHHHHHHHHHHHCCH
>Mature Secondary Structure 
TAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKW
CCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHC
PAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVWMPHSLPENSAVRWSSQMIN
CCCCCEEECCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TLQIQFHRLIKHQVEY
HHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503