| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yeaK
Identifier: 30062953
GI number: 30062953
Start: 1510058
End: 1510561
Strand: Reverse
Name: yeaK
Synonym: S1552
Alternate gene names: 30062953
Gene position: 1510561-1510058 (Counterclockwise)
Preceding gene: 30062955
Following gene: 30062951
Centisome position: 32.84
GC content: 50.79
Gene sequence:
>504_bases ATGACTGAAATGGCTAAAGGAAGCGTGACGCATCAGCAGTTAATCGCTTTATTATCACAAGAAGGTGCTAACTTCCGCGT CGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGTACCGCTCTAGGCCAGGGTGCTAAGGCAC TGGTATGTAAAGTCAAAGGCAATGGCGTAAATCAACATGTTCTGGCGATCCTCGCAGCCGATCAACAGGCCGATCTGAGC CAACTCGCCAGCCATATAGGCGGATTACGCGCTTCGTTGGCCAGCCCGGCGGAAGTTGATGAACTCACAGGCTGTGTCTT CGGCGCGATCCCCCCTTTCAGCTTCCATCCAAAACTCAAACTGGTTGCCGACCCTCTACTCTTCGAACGATTTGATGAAA TCGCCTTCAATGCAGGGATGCTGGATAAATCCGTTATTTTGAAAACCGCGGATTATTTGCGCATTGCGCAACCAGAACTG GTCAATTTCCGCCGCACTGCGTAG
Upstream 100 bases:
>100_bases TAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCT TGTAATCTCAGGAGCGTGAA
Downstream 100 bases:
>100_bases CTAGCCTATCCGTTCAATAAGCAGAACGGACAAAACCAGCACAACCGCAATAGCAAAAAACGATGATGTGATAATCAGTG TCTCGACGAACATTTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTEMAKGSVTHQQLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKGNGVNQHVLAILAADQQADLS QLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPEL VNFRRTA
Sequences:
>Translated_167_residues MTEMAKGSVTHQQLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKGNGVNQHVLAILAADQQADLS QLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPEL VNFRRTA >Mature_166_residues TEMAKGSVTHQQLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQ LASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELV NFRRTA
Specific function: Unknown
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788087, Length=167, Percent_Identity=98.8023952095808, Blast_Score=336, Evalue=4e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007214 [H]
Pfam domain/function: PF04073 YbaK [H]
EC number: NA
Molecular weight: Translated: 17822; Mature: 17691
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMAKGSVTHQQLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG CCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHH LVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCC >Mature Secondary Structure TEMAKGSVTHQQLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG CCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHH LVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]