| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yebW [H]
Identifier: 30062909
GI number: 30062909
Start: 1464148
End: 1464423
Strand: Reverse
Name: yebW [H]
Synonym: S1504
Alternate gene names: 30062909
Gene position: 1464423-1464148 (Counterclockwise)
Preceding gene: 30062910
Following gene: 30062903
Centisome position: 31.84
GC content: 44.93
Gene sequence:
>276_bases ATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGA TGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGTGAAGATATTGTTGTGGATGTCTACAACACGG AACAGCAGTGTCTTTATTCTATGAGCGATCAACGGATCCGCCATGGCAGTTGTTTTCCGATTGAGGATTTTATAGATGGT TTCTGGCAACCAGCACAGGAGTATGGTGATTTTTAA
Upstream 100 bases:
>100_bases TGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGA TCCAAAAAGAACCCGTCGGC
Downstream 100 bases:
>100_bases TTATTGCAGTTGCACAAGAGTCAGTTAGCCCCCAAAGACAGCACCGGTATCAATATAATGCAGGTTGCCAATATCCACGC GATGTCGCAACGGTGTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MAGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCEDIVVDVYNTEQQCLYSMSDQRIRHGSCFPIEDFIDG FWQPAQEYGDF
Sequences:
>Translated_91_residues MAGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCEDIVVDVYNTEQQCLYSMSDQRIRHGSCFPIEDFIDG FWQPAQEYGDF >Mature_90_residues AGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCEDIVVDVYNTEQQCLYSMSDQRIRHGSCFPIEDFIDGF WQPAQEYGDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081987, Length=63, Percent_Identity=95.2380952380952, Blast_Score=127, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009954 [H]
Pfam domain/function: PF07358 DUF1482 [H]
EC number: NA
Molecular weight: Translated: 10445; Mature: 10314
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCEDIVVDVYNTEQQCLYS CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH MSDQRIRHGSCFPIEDFIDGFWQPAQEYGDF HHHHHHCCCCCCCHHHHHHHHCCHHHHCCCC >Mature Secondary Structure AGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCEDIVVDVYNTEQQCLYS CCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH MSDQRIRHGSCFPIEDFIDGFWQPAQEYGDF HHHHHHCCCCCCCHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]