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The map label for this gene is ydbL

Identifier: 30062872

GI number: 30062872

Start: 1420558

End: 1420887

Strand: Reverse

Name: ydbL

Synonym: S1456

Alternate gene names: 30062872

Gene position: 1420887-1420558 (Counterclockwise)

Preceding gene: 30062873

Following gene: 30062871

Centisome position: 30.89

GC content: 44.24

Gene sequence:

>330_bases
ATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGA
AGCCAGAACTCAGGGGCGGGTAGGTGAAACATTTTATGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAAT
TAGTAACCGAAATTAATGCCGAACGTAAAGCGAGTTACCAACAACGGGCAAAGCAAAATAATGTGTCTGTAGATGATATC
GCGAAACTCGCCGGGCAAAAGCTCGTAGCTCGGGCCAAACCGGGGGAATATGTACAAGGGATAAACGGTAAATGGGTGCG
AAAGTTTTAA

Upstream 100 bases:

>100_bases
ACTATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCG
TAGCGATCTTTTCTGAGGCG

Downstream 100 bases:

>100_bases
TAGCAAAACCGCAATATCGGGATAACGCTACAGGAGAAAGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAA
ACTCCTGTCAAATTGCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTEINAERKASYQQRAKQNNVSVDDI
AKLAGQKLVARAKPGEYVQGINGKWVRKF

Sequences:

>Translated_109_residues
MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTEINAERKASYQQRAKQNNVSVDDI
AKLAGQKLVARAKPGEYVQGINGKWVRKF
>Mature_109_residues
MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTEINAERKASYQQRAKQNNVSVDDI
AKLAGQKLVARAKPGEYVQGINGKWVRKF

Specific function: Unknown

COG id: COG3784

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081895, Length=108, Percent_Identity=97.2222222222222, Blast_Score=213, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008309 [H]

Pfam domain/function: PF07027 DUF1318 [H]

EC number: NA

Molecular weight: Translated: 12096; Mature: 12096

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTEINA
CCHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCHHEEEEEEEECCCHHHHHHHHHCH
ERKASYQQRAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEECC
>Mature Secondary Structure
MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTEINA
CCHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCHHEEEEEEEECCCHHHHHHHHHCH
ERKASYQQRAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]