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The map label for this gene is ychP

Identifier: 30062744

GI number: 30062744

Start: 1269452

End: 1270705

Strand: Direct

Name: ychP

Synonym: S1307

Alternate gene names: 30062744

Gene position: 1269452-1270705 (Clockwise)

Preceding gene: 30062742

Following gene: 30062747

Centisome position: 27.6

GC content: 51.28

Gene sequence:

>1254_bases
ATGGCTCCCGAAAATCATGATGGGGAAAAACACTTTGCTGAAATTGTGAAAGATTTCGGCGAAACCAGTATGAATGATAA
CGGGCTGGATACTGGCGAGCAGGCAAAAGCTTTCGCATGGGGAAAAGTCCGCGACGCGCTTAGTCAACAGGTTAATCAGC
ACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGT
CGTGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAA
TGGGTTGGTGAGCAATGTGGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACA
ACTTGCAGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTT
TATCAGCCGTTTGCTGCATGGCATGAACAGACAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCG
GATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTA
ACTCTGGTACGGGTTATCACAATCCCGTCGCGTTGAGTCTGGGATTAAATTACACCCCTGTGCCATTAGTCACTGTGACG
GCCCAGCATAAACAGGGGGAAAGTGGCGAAAATCAAAATAACCTCGGGCTGAATCTTAATTACCGCTTTGGTGTACCGCT
CAAAAAACAACTTTCTGCGGGCGAGGTTGCCGAAAGTCAGTCGTTACGTGGTAGTCGCTATGACAATCCGCAGCGAAATA
ATCTACCGACTCTTGAGTACCGACAGCGAAAAACGTTAACGGTGTTTCTGGCGACACCGCCGTGGGATCTAAAACCTGGC
GAAACAGTGCCGCTGAAATTACAAATCCGCAGTCGTTACGGTATTCGGCAACTGATTTGGCAGGGCGATACGCAGATATT
AAGTTTGACGCCGGGCGCACAAGCCAACAGCGCGGAGGGCTGGACGCTGATCATGCCTGACTGGCAGAACGGGGAAGGGG
CAAGCAATCACTGGCGATTGTCTGTGGTGGTGGAAGATAACCAGGGGCAGCGTGTCTCCTCCAATGAGATCACGCTAACG
CTTGTCGAACCGTTCGATGCATTGTCAAACGACGAACTGCGCTGGGAACCGTAA

Upstream 100 bases:

>100_bases
CTTGCTTGTAGCAGGCGGTACAGCTAACGCACAATCTACCTTCGAGCAAAAAGCGGCAAATCCCTTTGATAATAACAATG
ATGGTCTGCCGGATTTAGGC

Downstream 100 bases:

>100_bases
TCAGAAAATGCGCTCCTGATGCACCCATACCGCTGCTTCCACGCGAGACTTGAGCTTCATTTTCTTCAGCATGTGCTTGA
CGTGCACTTTTACTGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFAWGKVRDALSQQVNQHVESWLSPWGNASVDVKVDNEGHFTGS
RGSWFVPLQDNDRYLTWSQLGLTQQDNGLVSNVGVGQRWARGNWLVGYNTFYDNLQDENLQRAGFGAEAWGEYLRLSANF
YQPFAAWHEQTATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVT
AQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPG
ETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLT
LVEPFDALSNDELRWEP

Sequences:

>Translated_417_residues
MAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFAWGKVRDALSQQVNQHVESWLSPWGNASVDVKVDNEGHFTGS
RGSWFVPLQDNDRYLTWSQLGLTQQDNGLVSNVGVGQRWARGNWLVGYNTFYDNLQDENLQRAGFGAEAWGEYLRLSANF
YQPFAAWHEQTATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVT
AQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPG
ETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLT
LVEPFDALSNDELRWEP
>Mature_416_residues
APENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFAWGKVRDALSQQVNQHVESWLSPWGNASVDVKVDNEGHFTGSR
GSWFVPLQDNDRYLTWSQLGLTQQDNGLVSNVGVGQRWARGNWLVGYNTFYDNLQDENLQRAGFGAEAWGEYLRLSANFY
QPFAAWHEQTATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVTA
QHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGE
TVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTL
VEPFDALSNDELRWEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intimin/invasin family [H]

Homologues:

Organism=Escherichia coli, GI145693120, Length=417, Percent_Identity=99.5203836930456, Blast_Score=850, Evalue=0.0,
Organism=Escherichia coli, GI145693153, Length=361, Percent_Identity=32.1329639889197, Blast_Score=168, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47112; Mature: 46980

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFAWGKVRDALSQQVNQHVESWLS
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDNGLVSNVGVGQRWA
CCCCCEEEEEECCCCCEECCCCCEEEEECCCCCEEEHHHCCCCCCCCCCEECCCCCCEEC
RGNWLVGYNTFYDNLQDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQTATQEQRMAR
CCCEEEEEHHHHCCCCCCCHHHCCCCHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHC
GYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVT
CCCEEEEECCCHHHHCCCCEEHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEE
AQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEY
ECCCCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCEE
RQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSAEG
CCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCCCC
WTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP
EEEECCCCCCCCCCCCEEEEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
APENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFAWGKVRDALSQQVNQHVESWLS
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDNGLVSNVGVGQRWA
CCCCCEEEEEECCCCCEECCCCCEEEEECCCCCEEEHHHCCCCCCCCCCEECCCCCCEEC
RGNWLVGYNTFYDNLQDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQTATQEQRMAR
CCCEEEEEHHHHCCCCCCCHHHCCCCHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHC
GYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVT
CCCEEEEECCCHHHHCCCCEEHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEE
AQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEY
ECCCCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCEE
RQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSAEG
CCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCCCC
WTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP
EEEECCCCCCCCCCCCEEEEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2657652; 2649492; 7567469 [H]