| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30062665
Identifier: 30062665
GI number: 30062665
Start: 1183915
End: 1184220
Strand: Direct
Name: 30062665
Synonym: S1217
Alternate gene names: NA
Gene position: 1183915-1184220 (Clockwise)
Preceding gene: 30062664
Following gene: 30062666
Centisome position: 25.74
GC content: 45.75
Gene sequence:
>306_bases ATGAGCGAACCAAAATTTGGTGAAAAATTTTACAAGCACAACGGACGGATCACGATTCTGCAAATAAGCGCAGCTACACC AGGCTGGTGGGTTGAAACAGACGAAGGATCCTCACCCGTGGCATCATGGGAGCTTTGTGTGCTTAGTTACCCTGACCGCG ATGTGTATCAGGATATTCTGCCTGTGATATCCACTGACAAAGGCATGAAACCCGTAGACATCAAAAACATGGGGTTTCAG TGCGTAATGCTCACTGAAAAAATGATGGAAGAGATGAAAAAGAACAATGCCGGATCGCTTCACTGA
Upstream 100 bases:
>100_bases TGACCACGACGGCGGCAAATTTTGCCACGCTGACAGAGCGGGAGATTGCCGAAGCGGAACAGGTAACAACAATCAACGTT AAAACCGGAGAGGTGGAATC
Downstream 100 bases:
>100_bases GGTGGCAATATGACAGCACAAATTGCAGCTTACGGGCAGCTGGTGGGCGACCCGCTGGTAAAACAGAGCAGCAAGGGCAC ACCGGAGCCGCCAACGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSEPKFGEKFYKHNGRITILQISAATPGWWVETDEGSSPVASWELCVLSYPDRDVYQDILPVISTDKGMKPVDIKNMGFQ CVMLTEKMMEEMKKNNAGSLH
Sequences:
>Translated_101_residues MSEPKFGEKFYKHNGRITILQISAATPGWWVETDEGSSPVASWELCVLSYPDRDVYQDILPVISTDKGMKPVDIKNMGFQ CVMLTEKMMEEMKKNNAGSLH >Mature_100_residues SEPKFGEKFYKHNGRITILQISAATPGWWVETDEGSSPVASWELCVLSYPDRDVYQDILPVISTDKGMKPVDIKNMGFQC VMLTEKMMEEMKKNNAGSLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11457; Mature: 11326
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPKFGEKFYKHNGRITILQISAATPGWWVETDEGSSPVASWELCVLSYPDRDVYQDIL CCCCCCCHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCCCEEEEEEEECCCHHHHHHHH PVISTDKGMKPVDIKNMGFQCVMLTEKMMEEMKKNNAGSLH HHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SEPKFGEKFYKHNGRITILQISAATPGWWVETDEGSSPVASWELCVLSYPDRDVYQDIL CCCCCCHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCCCEEEEEEEECCCHHHHHHHH PVISTDKGMKPVDIKNMGFQCVMLTEKMMEEMKKNNAGSLH HHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA