| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yceQ [H]
Identifier: 30062619
GI number: 30062619
Start: 1135057
End: 1135431
Strand: Direct
Name: yceQ [H]
Synonym: S1169
Alternate gene names: 30062619
Gene position: 1135057-1135431 (Clockwise)
Preceding gene: 30062617
Following gene: 30062620
Centisome position: 24.68
GC content: 46.4
Gene sequence:
>375_bases GTGTCTAGTCGCGTCGCCAACCTCACGGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGG AAAAACAGCGCAATTATCAAAGAAACAGACTGGGTATTACTCTCCAGAAATATTTCCATCTACCGGTAAGGACTGCAACC CGCAGCCCGCTAACTGCCTGAAAGATCAATACGTCTTACGCCATTGCTGCGTGGATGATCGGTCGGGCAAAATGGGTTAT TCCGTAAAATTTCTTGTTTTAACAAGGATGGACACGGAAACGGCCTCATTATTCCACTGCAAGCCTTGTTATAGCAAGAT GACTTTTACCATTTATCACCCGCTTACTCACAGTTTTTTCACTTCTTGCTGGTGA
Upstream 100 bases:
>100_bases TTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCC GGGTGTGAACCGATGGCCTC
Downstream 100 bases:
>100_bases TTGGTTTAATAACCATCAATAAAGTGATCACGTAGTGAAGTAATAAGGTGCAAAACTAAATATAAGCATAGAAAAATGAG TGGCGCGAATCCTGTTGGCT
Product: hypothetical protein
Products: NAD; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol [C]
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGY SVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFFTSCW
Sequences:
>Translated_124_residues MSSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGY SVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFFTSCW >Mature_123_residues SSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYS VKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFFTSCW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081829, Length=106, Percent_Identity=99.0566037735849, Blast_Score=224, Evalue=9e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020371 - ProDom: PD078424 [H]
Pfam domain/function: PF10848 DUF2655 [H]
EC number: NA
Molecular weight: Translated: 14110; Mature: 13979
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCL CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHH KDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFF HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCEEEEEECCCHHHHH TSCW HHCC >Mature Secondary Structure SSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCL CCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHH KDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFF HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCEEEEEECCCHHHHH TSCW HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; Proton; O2; 3-phenylpropionate [C]
Specific reaction: 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD 3-phenylpropionate + NADH + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]