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The map label for this gene is ycdZ

Identifier: 30062561

GI number: 30062561

Start: 1079376

End: 1079897

Strand: Direct

Name: ycdZ

Synonym: S1103

Alternate gene names: 30062561

Gene position: 1079376-1079897 (Clockwise)

Preceding gene: 30062560

Following gene: 30062565

Centisome position: 23.47

GC content: 54.21

Gene sequence:

>522_bases
ATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAACATACTTCTCTCTATTGCAATCACAACAGGCATTCTCTCCGGTAT
CTGGGGATGGGTGGCTGTTTCCCTGGGCTTACTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCTTGCCCGC
AAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTGCAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTCATTATTTACGGT
AGTGCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTCTGATGTGTATTCAGGCCAA
ACAGCTGCTGCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGG
TGTTACCTTCGCTGGCGCTTGGGCTGGTATTTGGTTACGCAATGAAAAACAGCGGCCTGTGGCTGGCGGCGCGTAGTGCA
AAGACGGCTCACCGTGAGCAGGAAATCAAAAATAAAGCGTGA

Upstream 100 bases:

>100_bases
ACGAGCTGGAAGAAGATTCTGAAGAGTAAATGTGATCATCGTCACTCATAACTGCAACAGATAATTTGTTGTTGCATAAA
ATGTGTGCTCGATCTCATTC

Downstream 100 bases:

>100_bases
GGGGCACTCACGCTTTCGCTTAAACAGTAAATGCCGGATTATTAATTCCGGCATTTTTATCTGTCAGGATTCCGGTGGAA
CCGACATATGGCGGTATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MAAFSAIMRGMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISAATLLSGVVWAMVIIYG
SALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSA
KTAHREQEIKNKA

Sequences:

>Translated_173_residues
MAAFSAIMRGMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISAATLLSGVVWAMVIIYG
SALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSA
KTAHREQEIKNKA
>Mature_172_residues
AAFSAIMRGMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISAATLLSGVVWAMVIIYGS
ALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAK
TAHREQEIKNKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahC [H]

Homologues:

Organism=Escherichia coli, GI87081825, Length=163, Percent_Identity=99.3865030674847, Blast_Score=319, Evalue=6e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 18097; Mature: 17966

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFSAIMRGMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAKTAHREQEIKNKA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAFSAIMRGMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAKTAHREQEIKNKA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]