| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is 30062390
Identifier: 30062390
GI number: 30062390
Start: 897790
End: 897996
Strand: Reverse
Name: 30062390
Synonym: S0906
Alternate gene names: NA
Gene position: 897996-897790 (Counterclockwise)
Preceding gene: 30062391
Following gene: 30062389
Centisome position: 19.52
GC content: 45.89
Gene sequence:
>207_bases ATGATTTACCCAACGAATACAGGAAAAAGCGGAGAACACCTTCGTCTCACCACGCTGGAAAGTGTCTGGATTCAGGGAAA ACTACGTATGTGGGGGCGCTGGTCGTATATTGGTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGC TCACCTCAGAACAACACAGGTGCTCCAATGAAAAAAAGAAATTTTAG
Upstream 100 bases:
>100_bases GGCGGGTAAAAACCAGCGATTACACCAAAGAAGAATTACGCCTGATGCATGCAGAAGGTGTTTTTCGCACACAAGAAATC TGGAGAAAGGAGGGATATTT
Downstream 100 bases:
>100_bases CGCAGAGTTTAAACGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCCAAAGCTATGGATG TTGGCCTTTCCACAATGACA
Product: putative bacteriophage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGVKWHTEFGHLNRGDMLTSEQHRCSNEKKKF
Sequences:
>Translated_68_residues MIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGVKWHTEFGHLNRGDMLTSEQHRCSNEKKKF >Mature_68_residues MIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGVKWHTEFGHLNRGDMLTSEQHRCSNEKKKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8093; Mature: 8093
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGVKWHTEFGHLNRGDMLTSEQHR CCCCCCCCCCCCEEEEEEECEEEEECEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCHH CSNEKKKF CCCCCCCC >Mature Secondary Structure MIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGVKWHTEFGHLNRGDMLTSEQHR CCCCCCCCCCCCEEEEEEECEEEEECEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCHH CSNEKKKF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA