Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is artJ

Identifier: 30062342

GI number: 30062342

Start: 841394

End: 842125

Strand: Reverse

Name: artJ

Synonym: S0856

Alternate gene names: 30062342

Gene position: 842125-841394 (Counterclockwise)

Preceding gene: 30062343

Following gene: 30062331

Centisome position: 18.31

GC content: 45.63

Gene sequence:

>732_bases
ATGAAAAAGTTAGTTCTTGCCGCTTTACTTGCTTCCTTTACTTTCGGTGCTTCTGCCGCAGAGAAAATCAATTTTGGCGT
TTCAGCCACCTATCCACCCTTTGAATCTATAGGTGCTAATAATGAGATTGTCGGCTTTGATATCGATCTGGCAAAAGCCT
TGTGCAAACAAATGCAGGCAGAATGTACTTTTACTAATCACGCGTTCGACAGCCTGATCCCGTCACTGAAATTCAGAAAA
TATGACGCCGTAATCTCCGGTATGGATATCACCCCGGAGCGTAGCAAGCAGGTTTCGTTTACCACACCCTACTATGAAAA
CTCAGCCGTCGTGATTTCCAAAAAAGATACCTACAAAACGTTTGCCGACCTGAAAGGCAAACGCATTGGGATGGAAAACG
GTACGACGCACCAGAAATATATTCAGGATCAGCACCCGGAAGTGAAAACTGTCTCCTATGACAGTTATCAGAATGCCTTT
ATCGATCTGAAAAATGGTCGTATTGATGGGGTATTTGGTGACACCGCGGTGGTAAACGAATGGCTGAAAACCAATCCGCA
ACTGGGCGTTGCGACTGAAAAAGTGACCGATCCGCAATACTTCGGCACCGGCCTGGGTATCGCTGTACGTCCGGATAACA
AAGCTCTGCTGGAAAAACTGAATAACGCGCTGGCAGCAATTAAAGCTGACGGTACATATCAGAAAATCAATGACCAGTGG
TTTCCGCAGTAA

Upstream 100 bases:

>100_bases
TTTAATCATGTTTATTGCATATAAATTCACTTGATGGCATTGTTATCCCATGCCGCAGACACGGCCAAAAATCATAAGAT
TGACAGACGGGAGTTCCATC

Downstream 100 bases:

>100_bases
TTGAGACTGATGACAAAAGTAAGATTGCCTGATGCGCTGCGCTTATCCGGCCCACATCAACTCTGCAATGTATTGATTTA
GCATGATTTTGTAGGCCGGA

Product: arginine 3rd transport system periplasmic binding protein

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRK
YDAVISGMDITPERSKQVSFTTPYYENSAVVISKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW
FPQ

Sequences:

>Translated_243_residues
MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRK
YDAVISGMDITPERSKQVSFTTPYYENSAVVISKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW
FPQ
>Mature_243_residues
MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRK
YDAVISGMDITPERSKQVSFTTPYYENSAVVISKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW
FPQ

Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1787085, Length=243, Percent_Identity=99.1769547325103, Blast_Score=501, Evalue=1e-143,
Organism=Escherichia coli, GI1787088, Length=241, Percent_Identity=64.7302904564315, Blast_Score=343, Evalue=8e-96,
Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=39.3013100436681, Blast_Score=167, Evalue=5e-43,
Organism=Escherichia coli, GI1788649, Length=253, Percent_Identity=35.5731225296443, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1788228, Length=220, Percent_Identity=32.7272727272727, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=29.5081967213115, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 26873; Mature: 26873

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQA
CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHCCCCCCEEEECHHHHHHHHHHHHH
ECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVISKKDTYKT
CCEECHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHH
FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTAVVNE
HHHCCCCEECCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCCEECCEECCHHHHHH
WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW
HHHCCCCCCCEECCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHEEEECCCCCEECCCCC
FPQ
CCC
>Mature Secondary Structure
MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQA
CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHCCCCCCEEEECHHHHHHHHHHHHH
ECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVISKKDTYKT
CCEECHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHH
FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTAVVNE
HHHCCCCEECCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCCEECCEECCHHHHHH
WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW
HHHCCCCCCCEECCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHEEEECCCCCEECCCCC
FPQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]