| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yliJ
Identifier: 30062319
GI number: 30062319
Start: 820168
End: 820800
Strand: Reverse
Name: yliJ
Synonym: S0831
Alternate gene names: 30062319
Gene position: 820800-820168 (Counterclockwise)
Preceding gene: 30062322
Following gene: 30062317
Centisome position: 17.85
GC content: 51.97
Gene sequence:
>633_bases GTGAGTATGATTACGCTGTGGGGTCGGAATAATTCAACTAACGTAAAAAAAGTATTGCTGACGCTCGAAGAACTGGAACT ACCTTATGAGCAAATTCTCGCGGGCCGTGAGTTTGGGATAAATCACGATGCTGATTTTCTGGCGATGAACCCTAACGGGC TGGTGCCGTTGTTGCGTGACGACGAAAGTGATCTCATTCTTTGGGAATCAAACGCCATTGTCCGCTATCTGGCGGCACAG TACGGGCAAAAACGCCTGTGGATCGACTCACCGGCACGTCGTGCGGAAGCGGAAAAATGGATGGACTGGGCAAACCAGAC GCTCAGTAATGCTCATCGCGGGATCCTGATGGGATTAGTCAGAACACCACCGGAAGAGCGCGATCAGGCCGCCATTGATG CCAGTTGCAAAGAGTGCGACGCCCTGTTTGCCCTGCTCGATGCGGAACTGGCAAAAGTAAAATGGTTCTCTGGCGACGAG TTTGGTGTGGGCGATATCGCTATCGCACCGTTCATCTACAATTTGTTTAACGTTGGCCTGACCTGGACACCGCGTCCAAA TCTGCAACGCTGGTATCAGCAACTCACTGAACGCCCCGCAGTGCGCAAAGTGGTGATGATTCCCGTTAGCTAA
Upstream 100 bases:
>100_bases GCTGCTTCTGGTGTCATTTTTTTGCCAGCTGTTGCTTAAAAGTTAACTTTACTTCACCATCGGAGTCCTGTTCAGTCTGT GGCTGCCTGTCGGAAAAGGG
Downstream 100 bases:
>100_bases TTGCGTGGGCTAACTTTAAGTAATTCCCCACTGGACTCGTCGGTGAGAACGTATAAATAACCGTCGGGTCCAGTGCGAAC ATCACGAATTCGCTGCCCTC
Product: putative transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSMITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQ YGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDE FGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS
Sequences:
>Translated_210_residues MSMITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQ YGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDE FGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS >Mature_209_residues SMITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQY GQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEF GVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081789, Length=208, Percent_Identity=100, Blast_Score=427, Evalue=1e-121, Organism=Escherichia coli, GI87082195, Length=208, Percent_Identity=28.3653846153846, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1788640, Length=204, Percent_Identity=26.4705882352941, Blast_Score=63, Evalue=1e-11, Organism=Drosophila melanogaster, GI24654965, Length=205, Percent_Identity=28.2926829268293, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI20130115, Length=206, Percent_Identity=28.1553398058252, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24654979, Length=207, Percent_Identity=28.9855072463768, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654975, Length=201, Percent_Identity=26.3681592039801, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 23932; Mature: 23800
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRD CCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEC DESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLV CCCCEEEEECCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGL CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCE TWTPRPNLQRWYQQLTERPAVRKVVMIPVS EECCCCCHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure SMITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRD CEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEC DESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLV CCCCEEEEECCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGL CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCE TWTPRPNLQRWYQQLTERPAVRKVVMIPVS EECCCCCHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]