| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is insK [H]
Identifier: 30062037
GI number: 30062037
Start: 506350
End: 506781
Strand: Direct
Name: insK [H]
Synonym: S0498
Alternate gene names: 30062037
Gene position: 506350-506781 (Clockwise)
Preceding gene: 30062036
Following gene: 30062038
Centisome position: 11.01
GC content: 47.45
Gene sequence:
>432_bases GTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTT TTATTACCATCTAAAGGCTCTCAGCAAGCCTGACAAGTATGCGGACGTTAAAAAGCGTATTGGTGAGATTTATCACGAGA ATAGAGGCCGATACGGATACCGTAGGGTAACGCTGTCTCTTCATCGAGAAGGGAAACAGATTAACCATAAAGCTGTTCAG CGCCTGATGGGAACCCTCTCACTTAAAGCAGCGATTAAGGTCAAGCGATACCGCTCTTACAGAGGAGAGGTAGGGCAAAC CGCCCCTAATGTTCTCCAAAGAGATTTCAAGCTACGCGGCCAAACGAGAAGTGGGTTACCGATGTTACTGAATTTGCAGT CAATGGGCGCAAGCTGTATTTGTCTCCAGTAA
Upstream 100 bases:
>100_bases AAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCC TTAGCTCATCCCACGAAAAA
Downstream 100 bases:
>100_bases TAGATCTCTTCAACAACGAAGTTATTTCTTACAGCCTTTCGGAAAGACCAGTGATGAACATGGTTGAGAATATGCTCGAT CAGGCATTCAAAAAGCTTAA
Product: IS150 orfB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVKKRIGEIYHENRGRYGYRRVTLSLHREGKQINHKAVQ RLMGTLSLKAAIKVKRYRSYRGEVGQTAPNVLQRDFKLRGQTRSGLPMLLNLQSMGASCICLQ
Sequences:
>Translated_143_residues MKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVKKRIGEIYHENRGRYGYRRVTLSLHREGKQINHKAVQ RLMGTLSLKAAIKVKRYRSYRGEVGQTAPNVLQRDFKLRGQTRSGLPMLLNLQSMGASCICLQ >Mature_143_residues MKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVKKRIGEIYHENRGRYGYRRVTLSLHREGKQINHKAVQ RLMGTLSLKAAIKVKRYRSYRGEVGQTAPNVLQRDFKLRGQTRSGLPMLLNLQSMGASCICLQ
Specific function: Involved in the transposition of the insertion sequence IS150 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1789981, Length=117, Percent_Identity=99.1452991452991, Blast_Score=239, Evalue=7e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 16626; Mature: 16626
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVKKRIGEIYHENRGRYGY CHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCH RRVTLSLHREGKQINHKAVQRLMGTLSLKAAIKVKRYRSYRGEVGQTAPNVLQRDFKLRG HHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC QTRSGLPMLLNLQSMGASCICLQ CCCCCCHHEEEHHHCCCEEEECC >Mature Secondary Structure MKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVKKRIGEIYHENRGRYGY CHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCH RRVTLSLHREGKQINHKAVQRLMGTLSLKAAIKVKRYRSYRGEVGQTAPNVLQRDFKLRG HHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC QTRSGLPMLLNLQSMGASCICLQ CCCCCCHHEEEHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2841644; 2541046; 8041620; 9278503 [H]