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The map label for this gene is ybaT

Identifier: 30061986

GI number: 30061986

Start: 448697

End: 449989

Strand: Direct

Name: ybaT

Synonym: S0438

Alternate gene names: 30061986

Gene position: 448697-449989 (Clockwise)

Preceding gene: 30061985

Following gene: 30061987

Centisome position: 9.76

GC content: 53.13

Gene sequence:

>1293_bases
ATGATGAACACGGAAGGTAATAACGGTAACAAACCCCTCGGTCTATGGAACGTCGTTTCCATCGGTATTGGGGCAATGGT
GGGGGCGGGGATCTTCGCGCTGCTGGGGCAGGCTGCGTTGCTAATGGAAGCCTCGACCTGGGGCGCCTTTGCTTTTGGCG
GTATTGTGGCTATGTTTTCCGGTTATGCCTATGCGCGTCTGGGGGCGAGCTATCCCAGCAATGGCGGTATTATCGACTTT
TTTCGTCGCGGATTAGGCAACGGCGTCTTTTCGCTAGCGCTCTCGTTGCTATACCTGTTGACGCTGGCGGTGAGCATCGC
CATGGTTGCCCGTGCTTTTGGCGCTTATGCCGTGCAGTTTTTGCATGAAGGCAGCCAGGAGGAGCACCTTATTTTGCTCT
ACGCGTTGGGGATCATTGCGGTGATGACGCTTTTCAACTCCTTAAGCAACCATGCGGTAGGGCGGCTGGAAGTGATCCTC
GTCGGCATTAAAATGATGATCCTGTTATTGCTGATTATTGCCGGTGTCTGGTCGCTGCAACCGGCGCATATTTCCGTCTC
TGCGCCCCCCAGCTCCGGTGCGTTCTTCTCCTGTATTGGGATAACCTTCCTTGCCTATGCGGGCTTTGGCATGATGGCGA
ACGCGGCGGATAAAGTGAAAGATCCGCAGGTCATTATGCCACGGGCGTTTCTGGTGGCGATTGGCGTTACCACGTTGCTT
TATATCTCGCTGGCGCTGGTTTTGCTTAGCGATGTATCGGCATTAGAGTTAGAAAAATATGCTGATACCGCCGTAGCGCA
GGCTGCTTCTCCGCTGCTCGGGCATGTGGGTTATGTGATCGTCGTCATCGGCGCTTTACTGGCGACGGCTTCAGGCATTA
ACGCGAACCTGTTCGCCGTGTTTAACATCATGGACAACATGGGCAGCGAACGCGAACTGCCGAAGCTAATGAATAAATCC
CTGTGGCGGCAGAGTACCTGGGGCAATATCATCGTCGTGGTGTTGATAATGCTGATGACGGCGGCGCTAAATTTAGACTC
ACTCGCCAGCGTTGCCAGCGCCACCTTTTTGATCTGCTATCTGGCGGTGTTTGTGGTGGCGATCCGCCTGCGTCATGATA
TTCACGCCTCGTTGCCGATTCTTATCGTTGGTACGTTGGTGATGTTGTTGGTGATCGTTGGCTTTATCTACAGCCTGTGG
TCCCAGGGCAGCCGTGCGTTGATATGGATTATTGGTGCAATCTTACTCAGCCTTATTGTGGCAATGGTCATGAAGCGTAA
TAAAACCGTATAA

Upstream 100 bases:

>100_bases
TCTCACCACCGCTGGACGAAGAAGGCAATAGTGTTCGCGGTCAAAAAATGGTGGCATCGGTCGCTAAGCAACTCGGCTAT
AACGTGTTTAAGGGCTGATC

Downstream 100 bases:

>100_bases
CACCTCTCTGTGCGCAGTACTTCCTGTATTATTGTGGTGGCGGTCGATATTCGCACTGGCAAAAAAACGTGCTTGAATAT
CTGTTGAAACCCTTTAACAA

Product: putative amino acid/amine transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWGAFAFGGIVAMFSGYAYARLGASYPSNGGIIDF
FRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQFLHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVIL
VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLL
YISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASGINANLFAVFNIMDNMGSERELPKLMNKS
LWRQSTWGNIIVVVLIMLMTAALNLDSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLW
SQGSRALIWIIGAILLSLIVAMVMKRNKTV

Sequences:

>Translated_430_residues
MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWGAFAFGGIVAMFSGYAYARLGASYPSNGGIIDF
FRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQFLHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVIL
VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLL
YISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASGINANLFAVFNIMDNMGSERELPKLMNKS
LWRQSTWGNIIVVVLIMLMTAALNLDSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLW
SQGSRALIWIIGAILLSLIVAMVMKRNKTV
>Mature_430_residues
MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWGAFAFGGIVAMFSGYAYARLGASYPSNGGIIDF
FRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQFLHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVIL
VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLL
YISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASGINANLFAVFNIMDNMGSERELPKLMNKS
LWRQSTWGNIIVVVLIMLMTAALNLDSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLW
SQGSRALIWIIGAILLSLIVAMVMKRNKTV

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI7657683, Length=305, Percent_Identity=24.9180327868852, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1786694, Length=430, Percent_Identity=98.8372093023256, Blast_Score=832, Evalue=0.0,
Organism=Caenorhabditis elegans, GI71995388, Length=447, Percent_Identity=22.1476510067114, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71995382, Length=447, Percent_Identity=22.1476510067114, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221331183, Length=305, Percent_Identity=25.2459016393443, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI17647653, Length=305, Percent_Identity=25.2459016393443, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24664379, Length=305, Percent_Identity=25.2459016393443, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI45550968, Length=404, Percent_Identity=22.7722772277228, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI19921172, Length=404, Percent_Identity=22.7722772277228, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24667468, Length=326, Percent_Identity=26.3803680981595, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 45645; Mature: 45645

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWGAFAFGGIVAMFS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
GYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQF
CHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQ
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLL
CCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHH
YISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASGINANLFAV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVVLIMLMTAALNLDSLASVASATFLICY
HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLWSQGSRALIWIIGAILLSLIV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AMVMKRNKTV
HHHHHCCCCC
>Mature Secondary Structure
MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWGAFAFGGIVAMFS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
GYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQF
CHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQ
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLL
CCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHH
YISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASGINANLFAV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVVLIMLMTAALNLDSLASVASATFLICY
HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLWSQGSRALIWIIGAILLSLIV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AMVMKRNKTV
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]