| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yaaX [H]
Identifier: 30061576
GI number: 30061576
Start: 5242
End: 5529
Strand: Direct
Name: yaaX [H]
Synonym: S0005
Alternate gene names: 30061576
Gene position: 5242-5529 (Clockwise)
Preceding gene: 30061575
Following gene: 30061578
Centisome position: 0.11
GC content: 54.86
Gene sequence:
>288_bases ATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCC GTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACTGGCGCGACCACGGCTGGT GGAAACAACATTATGAATGGCGAGGCAATCGCTGGCACCCACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCT CCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAA
Upstream 100 bases:
>100_bases AGATTAGGATTGCGGAGAATAACAACCGTCGTTCTCATCGCGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAA AGGAGTAACCTGTGAAAAAG
Downstream 100 bases:
>100_bases ATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTG CAATATATTGAATCTGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKA PHDHHGGHGPGKHHR
Sequences:
>Translated_95_residues MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKA PHDHHGGHGPGKHHR >Mature_95_residues MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKA PHDHHGGHGPGKHHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ypeC [H]
Homologues:
Organism=Escherichia coli, GI1786186, Length=95, Percent_Identity=98.9473684210526, Blast_Score=189, Evalue=4e-50, Organism=Escherichia coli, GI1788734, Length=68, Percent_Identity=60.2941176470588, Blast_Score=91, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019638 [H]
Pfam domain/function: PF10697 DUF2502 [H]
EC number: NA
Molecular weight: Translated: 10951; Mature: 10951
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEW CCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCEEECCCEECCCCCCCCHHCC RGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEW CCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCEEECCCEECCCCCCCCHHCC RGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1630901; 9278503 [H]