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The map label for this gene is 297616209

Identifier: 297616209

GI number: 297616209

Start: 1638166

End: 1638357

Strand: Reverse

Name: 297616209

Synonym: NA

Alternate gene names: NA

Gene position: 1638357-1638166 (Counterclockwise)

Preceding gene: 124028479

Following gene: 124028476

Centisome position: 98.27

GC content: 57.81

Gene sequence:

>192_bases
GTGCAGTGGCTCATGAGGAAGTGTACAGTCTGTGGCAGGTACACGCTGCAACGTGACCGCTGCCCAGTCTGTGGGGGCCC
CGTAGCTGTACCGCATCCGCCACGCTTCTCCCCCGAGGACAAGTATGTAGTATATCGCTATAGGATGAAGATGCTTGCGG
GACTAATACCGCGCAGCGAGAGTCAAGCCTAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: H/ACA RNA-protein complex component Nop10p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:
NA

Sequences:

>Translated_63_residues
MQWLMRKCTVCGRYTLQRDRCPVCGGPVAVPHPPRFSPEDKYVVYRYRMKMLAGLIPRSESQA
>Mature_63_residues
MQWLMRKCTVCGRYTLQRDRCPVCGGPVAVPHPPRFSPEDKYVVYRYRMKMLAGLIPRSESQA

Specific function: Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NOP10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007264 [H]

Pfam domain/function: PF04135 Nop10p [H]

EC number: NA

Molecular weight: Translated: 7331; Mature: 7331

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
12.7 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
12.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWLMRKCTVCGRYTLQRDRCPVCGGPVAVPHPPRFSPEDKYVVYRYRMKMLAGLIPRSE
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCC
SQA
CCC
>Mature Secondary Structure
MQWLMRKCTVCGRYTLQRDRCPVCGGPVAVPHPPRFSPEDKYVVYRYRMKMLAGLIPRSE
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCC
SQA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA