| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29350167
Identifier: 29350167
GI number: 29350167
Start: 6245427
End: 6246608
Strand: Reverse
Name: 29350167
Synonym: BT_4759
Alternate gene names: NA
Gene position: 6246608-6245427 (Counterclockwise)
Preceding gene: NA
Following gene: 29350166
Centisome position: 99.78
GC content: 49.92
Gene sequence:
>1182_bases GTGCAGGCTTTCGAGCCTTATATCGCACTCAACTCGCACGTCAGGAAACCGGTTATCCACATCTCATTGAATCCTTCCCC AAAAGACATTCTTTCAAAAGAACAAATGACCGTATTGGCGCAGGAGTTCATGGAAAAGTTCGGTTACGGGAACCAGCCCT ATATCGTATGGCTACACGAAGACATAGACCGTAAACACATGCACATCATTTCGGTACGTATCAACGAGAAGGGAGAAAAA ATAGACCACAACCGGGAAGCCATCCGGGCACAGAATATCTGTCGGGATATGGAAGTGAAGTACGGCCTTCATTCCACACT CGGAGAACACAGTGAAAGGGAATTACTATCCTTGCAAAAAGTGGATTATCCGAAAGGTGACGTGAAAGCGCAGGTGAAGC ATACTGCCCGTACTTTGCTGGAATGTTACAACTGCCATTCGCTTGCCGAATACAACACCCTTCTGAACTTGTATAACGTA ACCGTTTATGAAGTCAGGGGAAGCGTGGACGGGAAGGAATACTACGGCATCATGTACGGAGCTTTGGATGATGACGGACA GCAGGCAGGCACGCCTTTCAAGTCCAGCAAGTTCGGAAAGGTATTCGGTTATGAAGCCCTGCAAAAGAAGTTTGCCGCCA CCGCCGAAAAGGTGAAAAGGAACAGCCTTGCCGAAAGGGCACGGCAGGAAATAGTCAAAGCCATGCAGGACATAAGTACG AAAGAAGCGTTTGCCCGCAGGCTGAAAGATGCGGATATAGAGGTGGTTTACCGTATCAATCCCGAAGGACGCCTGTACGG TATCACTTTCATAGACCATACCAACCGGACAGTGTTCAACGGCTCGCGTTTGGGCAAGGCCTTTTCAGCCAATGTATTCA ACGAACTGTTCAATAATCCGGATGCGGACCGTACAAAGCTGATACCGCCACCGGAGCAGGATACGCCCCGGCAGGCACGG GAAACGGATGCGGAAGAAAGACAGGAAAGGGAGGAATACCGGCAGCAGGAAAATCGAGGCAACTATCAGAGTGAACCGTC CGGCAGTCTGATTGATACGTCCGCACTCGGTGCCATTGACATTTTCTCCGTACTCATGGAAGATGACCATACGCACGAGT ACATCGATCCGGCCTTCCGCTTCGGGCACAAGAAAAAGAAGAAGCGCAGGCGCAGGTTATAA
Upstream 100 bases:
>100_bases TGCCTATAATAAGATAAAGGTGGACGACGGTACGGCAAAGGTATTGTGACACCCGAAAATAGCGGCGGACACTTCCGGCA ATGTGCCGATTGAAAACTGC
Downstream 100 bases:
>100_bases TATAATAATGTATAGAAGAAGTCTAATTTTAATAGTTACAATTATGCAGAATGAAGATGATTTAAGAGGTCTTGCCAAAG TCACGGACTTTATGCGGGCC
Product: putative mobilization protein
Products: NA
Alternate protein names: Relaxase/Mobilization Nuclease Family Protein; Relaxase/Mobilization Nuclease Domain Protein; MobB Protein; Mobilization Protein BmgA; MbpB Protein; Mobilisation Protein
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MQAFEPYIALNSHVRKPVIHISLNPSPKDILSKEQMTVLAQEFMEKFGYGNQPYIVWLHEDIDRKHMHIISVRINEKGEK IDHNREAIRAQNICRDMEVKYGLHSTLGEHSERELLSLQKVDYPKGDVKAQVKHTARTLLECYNCHSLAEYNTLLNLYNV TVYEVRGSVDGKEYYGIMYGALDDDGQQAGTPFKSSKFGKVFGYEALQKKFAATAEKVKRNSLAERARQEIVKAMQDIST KEAFARRLKDADIEVVYRINPEGRLYGITFIDHTNRTVFNGSRLGKAFSANVFNELFNNPDADRTKLIPPPEQDTPRQAR ETDAEERQEREEYRQQENRGNYQSEPSGSLIDTSALGAIDIFSVLMEDDHTHEYIDPAFRFGHKKKKKRRRRL
Sequences:
>Translated_393_residues MQAFEPYIALNSHVRKPVIHISLNPSPKDILSKEQMTVLAQEFMEKFGYGNQPYIVWLHEDIDRKHMHIISVRINEKGEK IDHNREAIRAQNICRDMEVKYGLHSTLGEHSERELLSLQKVDYPKGDVKAQVKHTARTLLECYNCHSLAEYNTLLNLYNV TVYEVRGSVDGKEYYGIMYGALDDDGQQAGTPFKSSKFGKVFGYEALQKKFAATAEKVKRNSLAERARQEIVKAMQDIST KEAFARRLKDADIEVVYRINPEGRLYGITFIDHTNRTVFNGSRLGKAFSANVFNELFNNPDADRTKLIPPPEQDTPRQAR ETDAEERQEREEYRQQENRGNYQSEPSGSLIDTSALGAIDIFSVLMEDDHTHEYIDPAFRFGHKKKKKRRRRL >Mature_393_residues MQAFEPYIALNSHVRKPVIHISLNPSPKDILSKEQMTVLAQEFMEKFGYGNQPYIVWLHEDIDRKHMHIISVRINEKGEK IDHNREAIRAQNICRDMEVKYGLHSTLGEHSERELLSLQKVDYPKGDVKAQVKHTARTLLECYNCHSLAEYNTLLNLYNV TVYEVRGSVDGKEYYGIMYGALDDDGQQAGTPFKSSKFGKVFGYEALQKKFAATAEKVKRNSLAERARQEIVKAMQDIST KEAFARRLKDADIEVVYRINPEGRLYGITFIDHTNRTVFNGSRLGKAFSANVFNELFNNPDADRTKLIPPPEQDTPRQAR ETDAEERQEREEYRQQENRGNYQSEPSGSLIDTSALGAIDIFSVLMEDDHTHEYIDPAFRFGHKKKKKRRRRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45392; Mature: 45392
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFEPYIALNSHVRKPVIHISLNPSPKDILSKEQMTVLAQEFMEKFGYGNQPYIVWLHE CCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC DIDRKHMHIISVRINEKGEKIDHNREAIRAQNICRDMEVKYGLHSTLGEHSERELLSLQK CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHH VDYPKGDVKAQVKHTARTLLECYNCHSLAEYNTLLNLYNVTVYEVRGSVDGKEYYGIMYG CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEEE ALDDDGQQAGTPFKSSKFGKVFGYEALQKKFAATAEKVKRNSLAERARQEIVKAMQDIST CCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH KEAFARRLKDADIEVVYRINPEGRLYGITFIDHTNRTVFNGSRLGKAFSANVFNELFNNP HHHHHHHHCCCCEEEEEEECCCCEEEEEEEEECCCCEEECCHHHCHHHHHHHHHHHHCCC DADRTKLIPPPEQDTPRQARETDAEERQEREEYRQQENRGNYQSEPSGSLIDTSALGAID CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHH IFSVLMEDDHTHEYIDPAFRFGHKKKKKRRRRL HHHHHHCCCCCHHHHCHHHHHCHHHHHHHHCCC >Mature Secondary Structure MQAFEPYIALNSHVRKPVIHISLNPSPKDILSKEQMTVLAQEFMEKFGYGNQPYIVWLHE CCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC DIDRKHMHIISVRINEKGEKIDHNREAIRAQNICRDMEVKYGLHSTLGEHSERELLSLQK CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHH VDYPKGDVKAQVKHTARTLLECYNCHSLAEYNTLLNLYNVTVYEVRGSVDGKEYYGIMYG CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEEE ALDDDGQQAGTPFKSSKFGKVFGYEALQKKFAATAEKVKRNSLAERARQEIVKAMQDIST CCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH KEAFARRLKDADIEVVYRINPEGRLYGITFIDHTNRTVFNGSRLGKAFSANVFNELFNNP HHHHHHHHCCCCEEEEEEECCCCEEEEEEEEECCCCEEECCHHHCHHHHHHHHHHHHCCC DADRTKLIPPPEQDTPRQARETDAEERQEREEYRQQENRGNYQSEPSGSLIDTSALGAID CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHH IFSVLMEDDHTHEYIDPAFRFGHKKKKKRRRRL HHHHHHCCCCCHHHHCHHHHHCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA