Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29350093

Identifier: 29350093

GI number: 29350093

Start: 6147951

End: 6148466

Strand: Reverse

Name: 29350093

Synonym: BT_4685

Alternate gene names: NA

Gene position: 6148466-6147951 (Counterclockwise)

Preceding gene: 29350094

Following gene: 29350092

Centisome position: 98.21

GC content: 40.89

Gene sequence:

>516_bases
ATGAAAAAGATAATTAAATATTTATTTTTGCTGACAGGGGGAAGCTTTATACTCGCTTCTTGCAATGTTTTTTTGGACAG
GGAACCTTTAGACAGTGTGACCCCGGACAACTTTTTCTTTACTGAAAATGACTTGGCTGCCTATGCTGTAAAGCATTACA
ACTTCAGGACGCATGAGGGATTTAATGCCGGAATCTGGAAAAACGACAATGCTACAGATAATCAGGCTGCCACTGACTAT
GATAAGAAATGGATTCCCGGTCAATGGAAAGTTCCGGAAGCTTATGATAATCCAGCAAGTAATGATCCGTGGTATTTCTC
TGCCATTCGTGAAGCTAATTACTTCCTCGCAACAGTAGTGCCCCGCTTCGAAAATGAAGCGCATTATCTGAATCCTATCG
CTATCACGCACTTCAGAATTAGAGCCTCAAATCCTAACGATCTGAGTACTTCTATTATTTACCAGAATCCAGGATGGCCA
ATTCAAGCCAATGAAGGCCCGATAGGTATTAAATAA

Upstream 100 bases:

>100_bases
CCAACCTGAGCGAAAGACGGATCGAACAGTTCAGGAAAAACTTATCCGTTGTCCCGTACTTTTTCCACAGGATTTAGTGT
TAACTTTTAATTGATGACGT

Downstream 100 bases:

>100_bases
AGATATAGGTCATTTCGGATATGGTAAAAAGTGTAGGACGCACCGGGCTAATGTTTAAGAAAAAATAAAGCTCAGCGTCC
TATGCTTCAAACTATTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKKIIKYLFLLTGGSFILASCNVFLDREPLDSVTPDNFFFTENDLAAYAVKHYNFRTHEGFNAGIWKNDNATDNQAATDY
DKKWIPGQWKVPEAYDNPASNDPWYFSAIREANYFLATVVPRFENEAHYLNPIAITHFRIRASNPNDLSTSIIYQNPGWP
IQANEGPIGIK

Sequences:

>Translated_171_residues
MKKIIKYLFLLTGGSFILASCNVFLDREPLDSVTPDNFFFTENDLAAYAVKHYNFRTHEGFNAGIWKNDNATDNQAATDY
DKKWIPGQWKVPEAYDNPASNDPWYFSAIREANYFLATVVPRFENEAHYLNPIAITHFRIRASNPNDLSTSIIYQNPGWP
IQANEGPIGIK
>Mature_171_residues
MKKIIKYLFLLTGGSFILASCNVFLDREPLDSVTPDNFFFTENDLAAYAVKHYNFRTHEGFNAGIWKNDNATDNQAATDY
DKKWIPGQWKVPEAYDNPASNDPWYFSAIREANYFLATVVPRFENEAHYLNPIAITHFRIRASNPNDLSTSIIYQNPGWP
IQANEGPIGIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19556; Mature: 19556

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIKYLFLLTGGSFILASCNVFLDREPLDSVTPDNFFFTENDLAAYAVKHYNFRTHEG
CHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCC
FNAGIWKNDNATDNQAATDYDKKWIPGQWKVPEAYDNPASNDPWYFSAIREANYFLATVV
CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE
PRFENEAHYLNPIAITHFRIRASNPNDLSTSIIYQNPGWPIQANEGPIGIK
CCCCCCCEEECCEEEEEEEEECCCCCCCEEEEEEECCCCCEECCCCCCCCC
>Mature Secondary Structure
MKKIIKYLFLLTGGSFILASCNVFLDREPLDSVTPDNFFFTENDLAAYAVKHYNFRTHEG
CHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCC
FNAGIWKNDNATDNQAATDYDKKWIPGQWKVPEAYDNPASNDPWYFSAIREANYFLATVV
CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE
PRFENEAHYLNPIAITHFRIRASNPNDLSTSIIYQNPGWPIQANEGPIGIK
CCCCCCCEEECCEEEEEEEEECCCCCCCEEEEEEECCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA