Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29350041

Identifier: 29350041

GI number: 29350041

Start: 6065247

End: 6067130

Strand: Reverse

Name: 29350041

Synonym: BT_4633

Alternate gene names: NA

Gene position: 6067130-6065247 (Counterclockwise)

Preceding gene: 29350042

Following gene: 29350040

Centisome position: 96.91

GC content: 40.34

Gene sequence:

>1884_bases
ATGAAAACAAAAAAGAAACTATATAGGAAAGTACTGATAGTAGCTTTTACGCTATGCAATCTCTGTTCATGCAACTATCT
GGATGTATCAGATGAACTAGCCGGAAATCTTCAATCGTTGGATGAGATATTTGACAATGTCGCCTATACCAAAAGATGGT
ATGCCAATATTTTTACTGCTATCCCTGATTATTCGGGTATCGTCGCTGCAGAAGGCAACGTCACAGGCTTCAAAAACCCT
TGGGCTGGTATGTGTGACGAACTAACCGTTGGCTATGGAGACAACAAATTATACAATAAAACAGAAAAAAATGCAGCAAA
CATGGGTTTTCACCGTTGGGGAAATTGTTATAAACAAATTCGGCAAGCTAATATTTTTCTGGCCAATGCCAAACCAATAG
CTGCCAATGGCACCCACGTCGATGTTCTGACAGAAGAGGAACTTATAGAAATGAAAGCTAATGTCCGTTTTATGAGAGCT
TATTATCATTATCTTTTGTTTGAGCAATATGGACCTATTCCTCTTGTAAAAGACGCCATTTACGAAAGAGATGATGACTT
AGATATTCCACGTAGTCCGATTGATGAGATTATAGCTTACATTGATCAGGAACTGAAAGAAGTATCCAATGAACTGTCAC
AAGAAGCTCTACATGAGGATGACCAACACAATGCGTGGCCCACAAAAGGTGTAGCACTGGCAGTCAGAGCTAAACTATGG
GTATATGCCGCCAGTAAATTATTCAATGGCGAGTACAAAGAAGCATTATCGATTACTAATCCTGACGGACAACGGCTTTT
CCCAGATAAAGATCCCGGAAAATGGGAGAAAGCAGTAAGTGCTTTGAAAGATTTCATGACATTCGCTGAAGATGAAAACA
ATTATGAATTGTTGGAAAATGAAGAGAACCCTTCACAAGCATTGTATGATTTATTTCAAACTTACAATCGAGAAATTATA
TGGGCCACTGCTGCCAATACCTGGGGTGGTATGGATGGAGATGCCTTTGACCGCAGATGTACCCCAAGAAGTGAACAAAA
TGGAATGGGATGTACGGGTGTCACTCAAGAATTGGTAGATGCATTCTATATGAATGATGGTTATCCGGTACAAGAAACAA
GTTTCCTAAAACAGTCTACACTCTACACAACCGAGGGAACAGACACTTATAAGGAAAAAGTCGTTACCAGCAACAATAAG
AAAGTAAGTGATGCCAAGAATGTCAGCAATCGATTCATGAATCGTGAACCACGTTTCTATAATACCGTATTCTTTCAAAA
CAGAAGATGGCACGTCAGTAATAACGTTACCCAGTTCCATAAAGGAAGTCCTAATGAACTTAGTGGTACTATTTATACTC
TTACGGGCTATATGCTGTATAAGAGATTTAATCGTGAGGTTAATAAGAAATCACCGGGAGTTACATCAAAATTCCGTCCT
TCTATCATTTTCCGTCTAGCCGATTTTTACCTGCTATACGCAGAAGCTGTCAACGAAATCGATCCTAACGATGCACGAGT
ATTGACCTACCTGAATAAAGTACGTCACCGCGCAGGATTAGAAAATATAGAAATTTTGAATCCTGACATTGCAGGCAAAC
AGGATCTGCAAAGACTGGCTATACAGCGTGAACGCCGCATCGAACTGGCTACTGAAGGACAACGTTATTTCGACGTACGC
CGCTGGATGATAGCTGACCAAGAAGGTGAAGGACGTCAATATGGATACGTGCATGGTATGAACATGAATGGAACTGAAGA
TAAATTCCTTCAGGAAGTAGAGGCCAGCCCCATCGTATTCAGACGCAAAATGTACCTATATCCTATTCCGGATAGTGAAA
TGAAAAAGTCTGATGGACAACTTGTTCAGAATCCGGGATGGTAA

Upstream 100 bases:

>100_bases
TGATCCGGAAGCTGGTAATGCCAATGGTGGTAATACATACCCCAAAGCACGGACATTTACTTTAGGAATTGACTTTACAT
TCTAATTAAATTTATTAAGT

Downstream 100 bases:

>100_bases
TCTTAATTATATTTCATGATTAAAAATATAATAACAATATGAAAACGATACATACCTTATTAGCAGCAATGACTATTGCG
ATGCTGGCAATAAGTTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 627; Mature: 627

Protein sequence:

>627_residues
MKTKKKLYRKVLIVAFTLCNLCSCNYLDVSDELAGNLQSLDEIFDNVAYTKRWYANIFTAIPDYSGIVAAEGNVTGFKNP
WAGMCDELTVGYGDNKLYNKTEKNAANMGFHRWGNCYKQIRQANIFLANAKPIAANGTHVDVLTEEELIEMKANVRFMRA
YYHYLLFEQYGPIPLVKDAIYERDDDLDIPRSPIDEIIAYIDQELKEVSNELSQEALHEDDQHNAWPTKGVALAVRAKLW
VYAASKLFNGEYKEALSITNPDGQRLFPDKDPGKWEKAVSALKDFMTFAEDENNYELLENEENPSQALYDLFQTYNREII
WATAANTWGGMDGDAFDRRCTPRSEQNGMGCTGVTQELVDAFYMNDGYPVQETSFLKQSTLYTTEGTDTYKEKVVTSNNK
KVSDAKNVSNRFMNREPRFYNTVFFQNRRWHVSNNVTQFHKGSPNELSGTIYTLTGYMLYKRFNREVNKKSPGVTSKFRP
SIIFRLADFYLLYAEAVNEIDPNDARVLTYLNKVRHRAGLENIEILNPDIAGKQDLQRLAIQRERRIELATEGQRYFDVR
RWMIADQEGEGRQYGYVHGMNMNGTEDKFLQEVEASPIVFRRKMYLYPIPDSEMKKSDGQLVQNPGW

Sequences:

>Translated_627_residues
MKTKKKLYRKVLIVAFTLCNLCSCNYLDVSDELAGNLQSLDEIFDNVAYTKRWYANIFTAIPDYSGIVAAEGNVTGFKNP
WAGMCDELTVGYGDNKLYNKTEKNAANMGFHRWGNCYKQIRQANIFLANAKPIAANGTHVDVLTEEELIEMKANVRFMRA
YYHYLLFEQYGPIPLVKDAIYERDDDLDIPRSPIDEIIAYIDQELKEVSNELSQEALHEDDQHNAWPTKGVALAVRAKLW
VYAASKLFNGEYKEALSITNPDGQRLFPDKDPGKWEKAVSALKDFMTFAEDENNYELLENEENPSQALYDLFQTYNREII
WATAANTWGGMDGDAFDRRCTPRSEQNGMGCTGVTQELVDAFYMNDGYPVQETSFLKQSTLYTTEGTDTYKEKVVTSNNK
KVSDAKNVSNRFMNREPRFYNTVFFQNRRWHVSNNVTQFHKGSPNELSGTIYTLTGYMLYKRFNREVNKKSPGVTSKFRP
SIIFRLADFYLLYAEAVNEIDPNDARVLTYLNKVRHRAGLENIEILNPDIAGKQDLQRLAIQRERRIELATEGQRYFDVR
RWMIADQEGEGRQYGYVHGMNMNGTEDKFLQEVEASPIVFRRKMYLYPIPDSEMKKSDGQLVQNPGW
>Mature_627_residues
MKTKKKLYRKVLIVAFTLCNLCSCNYLDVSDELAGNLQSLDEIFDNVAYTKRWYANIFTAIPDYSGIVAAEGNVTGFKNP
WAGMCDELTVGYGDNKLYNKTEKNAANMGFHRWGNCYKQIRQANIFLANAKPIAANGTHVDVLTEEELIEMKANVRFMRA
YYHYLLFEQYGPIPLVKDAIYERDDDLDIPRSPIDEIIAYIDQELKEVSNELSQEALHEDDQHNAWPTKGVALAVRAKLW
VYAASKLFNGEYKEALSITNPDGQRLFPDKDPGKWEKAVSALKDFMTFAEDENNYELLENEENPSQALYDLFQTYNREII
WATAANTWGGMDGDAFDRRCTPRSEQNGMGCTGVTQELVDAFYMNDGYPVQETSFLKQSTLYTTEGTDTYKEKVVTSNNK
KVSDAKNVSNRFMNREPRFYNTVFFQNRRWHVSNNVTQFHKGSPNELSGTIYTLTGYMLYKRFNREVNKKSPGVTSKFRP
SIIFRLADFYLLYAEAVNEIDPNDARVLTYLNKVRHRAGLENIEILNPDIAGKQDLQRLAIQRERRIELATEGQRYFDVR
RWMIADQEGEGRQYGYVHGMNMNGTEDKFLQEVEASPIVFRRKMYLYPIPDSEMKKSDGQLVQNPGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72291; Mature: 72291

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKKKLYRKVLIVAFTLCNLCSCNYLDVSDELAGNLQSLDEIFDNVAYTKRWYANIFTA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IPDYSGIVAAEGNVTGFKNPWAGMCDELTVGYGDNKLYNKTEKNAANMGFHRWGNCYKQI
CCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
RQANIFLANAKPIAANGTHVDVLTEEELIEMKANVRFMRAYYHYLLFEQYGPIPLVKDAI
HHCCEEEECCCCEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
YERDDDLDIPRSPIDEIIAYIDQELKEVSNELSQEALHEDDQHNAWPTKGVALAVRAKLW
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH
VYAASKLFNGEYKEALSITNPDGQRLFPDKDPGKWEKAVSALKDFMTFAEDENNYELLEN
HHHHHHHHCCHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCC
EENPSQALYDLFQTYNREIIWATAANTWGGMDGDAFDRRCTPRSEQNGMGCTGVTQELVD
CCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AFYMNDGYPVQETSFLKQSTLYTTEGTDTYKEKVVTSNNKKVSDAKNVSNRFMNREPRFY
HHHCCCCCCCCHHHHHHHHCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEE
NTVFFQNRRWHVSNNVTQFHKGSPNELSGTIYTLTGYMLYKRFNREVNKKSPGVTSKFRP
EEEEEECCEEEECCCCHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCH
SIIFRLADFYLLYAEAVNEIDPNDARVLTYLNKVRHRAGLENIEILNPDIAGKQDLQRLA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHH
IQRERRIELATEGQRYFDVRRWMIADQEGEGRQYGYVHGMNMNGTEDKFLQEVEASPIVF
HHHHHCCCHHCCCHHHHHHHHHHEECCCCCCCEECEEECCCCCCCHHHHHHHHCCCCEEE
RRKMYLYPIPDSEMKKSDGQLVQNPGW
EEEEEEEECCCHHHHCCCCCEECCCCC
>Mature Secondary Structure
MKTKKKLYRKVLIVAFTLCNLCSCNYLDVSDELAGNLQSLDEIFDNVAYTKRWYANIFTA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IPDYSGIVAAEGNVTGFKNPWAGMCDELTVGYGDNKLYNKTEKNAANMGFHRWGNCYKQI
CCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
RQANIFLANAKPIAANGTHVDVLTEEELIEMKANVRFMRAYYHYLLFEQYGPIPLVKDAI
HHCCEEEECCCCEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
YERDDDLDIPRSPIDEIIAYIDQELKEVSNELSQEALHEDDQHNAWPTKGVALAVRAKLW
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH
VYAASKLFNGEYKEALSITNPDGQRLFPDKDPGKWEKAVSALKDFMTFAEDENNYELLEN
HHHHHHHHCCHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCC
EENPSQALYDLFQTYNREIIWATAANTWGGMDGDAFDRRCTPRSEQNGMGCTGVTQELVD
CCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AFYMNDGYPVQETSFLKQSTLYTTEGTDTYKEKVVTSNNKKVSDAKNVSNRFMNREPRFY
HHHCCCCCCCCHHHHHHHHCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEE
NTVFFQNRRWHVSNNVTQFHKGSPNELSGTIYTLTGYMLYKRFNREVNKKSPGVTSKFRP
EEEEEECCEEEECCCCHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCH
SIIFRLADFYLLYAEAVNEIDPNDARVLTYLNKVRHRAGLENIEILNPDIAGKQDLQRLA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHH
IQRERRIELATEGQRYFDVRRWMIADQEGEGRQYGYVHGMNMNGTEDKFLQEVEASPIVF
HHHHHCCCHHCCCHHHHHHHHHHEECCCCCCCEECEEECCCCCCCHHHHHHHHCCCCEEE
RRKMYLYPIPDSEMKKSDGQLVQNPGW
EEEEEEEECCCHHHHCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA