Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29350021

Identifier: 29350021

GI number: 29350021

Start: 6038485

End: 6039768

Strand: Reverse

Name: 29350021

Synonym: BT_4613

Alternate gene names: NA

Gene position: 6039768-6038485 (Counterclockwise)

Preceding gene: 29350035

Following gene: 29350020

Centisome position: 96.48

GC content: 40.81

Gene sequence:

>1284_bases
ATGAGAACAATCGTCCTATTTCTAATCCTGTTTGGTTGTGGTTCCTCTCATATCACAGCGCAAAATGATTATCTTGTTAC
TACTATTTCCAATCAGGAAGGCCCTCTAAGTGAAGAAGAACAGTTCATAAAAGAGAACTTCCCACTGCAACTTTTATGTA
AATGGACACCCGGAATGAAATTCATGTTTATTCCATCCGGACGTGACATGTTCCTCCCTACCCTTTTGGTGTATGAGACA
GAAAAAGGGGCAGACAACAGCGTTCTGAAACACAAGATTCTTACTTTCGCCGGATATGAAGAAAAATCTCAAGAACTATC
AAATGACATGAGCTATTCCACTCGACTCATCTTCGAATGTGACGGAGAAAAATATTATTATGAGATTAAAAATACACGTC
CGGATGAAATTTGCGAAAAGAATCCCCGTGCCTATATCAACGGATTAGTTAATCTGAAAGACGTAGACACGGCAAAAGAA
TTGCTGACAGGCAGAAAGATATATGTTCAGTCCGATATGGCACGGGTGGACGACGCCAATAGTTACTCCGGATATCGGAA
AGTGTCTATTCCGGTCAACACCGAAGCAACCATTACCGCCATAGGAGTTGGCAGTCAGTCATATCCCGTGAAAATCATAT
TTCAAGATTCGCAGGGACATTCCTATTATCTGGAAGTAGCTCTTTCCCGCACTAATTCCGGTATGGACGTGAGCGATTTC
CAAGCTGAAAAGAAAATGAGATATTTTCCCAACGCCATCAGTTTCAGTAGCAAAAAGTCCGGAAATCTGGAAACCTTGAA
AGACAAATATATTGATCTGACCGTCTATCCGAAACGGACATTGGCTGTAAAAAGAGTCTTCAGCCTTGAAAACAAGCAAA
TGGAAAACCGCATACATTTGCCTCGCTACACTGTTTTGAAAATAAAAGAAATAAAAATCTCCGGTCCGGGAAGTCTGGTT
ATCCTCTCACTGGAGGATTGGCATGGATCACTTTATGAAACAGAGGTTGATTTGAAATATGATGTTATCGTCAAAAACGA
GAATTATATTGAAGACCTTTTCGGATTTGGAGACATCCATCAGAAGTATCCGGCTATCACAGATAAACATTGGGCAATCA
TCGCACGGGGTGATTTGGAAGAAGGTATGAACACCGACGAATGTCGTCTGTCAATAGGTGATCCTGTAGAAATACAGTTA
AAAAAAGACAGTCGTTTCGAAACTTGGTTCTACAACGGAAAAACGCTGGAATTTGAGAGTGGCATCTTGCAACGTTTCAA
ATAA

Upstream 100 bases:

>100_bases
AGATTGGGAAATACCATCTAATACGATATAAAATACATACATTTGCCATTATCTATAAAACAAACAATAAGATTACATAG
TTCATCTAAAGTAAATAAAT

Downstream 100 bases:

>100_bases
AAAGGAGTAGCGACGCGGTGATTATCTGAAAATAATCACGTATATTTGCCAAGCTAACAATTCTAAAATCTTAATTTTTG
ATTTATAATTTATTAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MRTIVLFLILFGCGSSHITAQNDYLVTTISNQEGPLSEEEQFIKENFPLQLLCKWTPGMKFMFIPSGRDMFLPTLLVYET
EKGADNSVLKHKILTFAGYEEKSQELSNDMSYSTRLIFECDGEKYYYEIKNTRPDEICEKNPRAYINGLVNLKDVDTAKE
LLTGRKIYVQSDMARVDDANSYSGYRKVSIPVNTEATITAIGVGSQSYPVKIIFQDSQGHSYYLEVALSRTNSGMDVSDF
QAEKKMRYFPNAISFSSKKSGNLETLKDKYIDLTVYPKRTLAVKRVFSLENKQMENRIHLPRYTVLKIKEIKISGPGSLV
ILSLEDWHGSLYETEVDLKYDVIVKNENYIEDLFGFGDIHQKYPAITDKHWAIIARGDLEEGMNTDECRLSIGDPVEIQL
KKDSRFETWFYNGKTLEFESGILQRFK

Sequences:

>Translated_427_residues
MRTIVLFLILFGCGSSHITAQNDYLVTTISNQEGPLSEEEQFIKENFPLQLLCKWTPGMKFMFIPSGRDMFLPTLLVYET
EKGADNSVLKHKILTFAGYEEKSQELSNDMSYSTRLIFECDGEKYYYEIKNTRPDEICEKNPRAYINGLVNLKDVDTAKE
LLTGRKIYVQSDMARVDDANSYSGYRKVSIPVNTEATITAIGVGSQSYPVKIIFQDSQGHSYYLEVALSRTNSGMDVSDF
QAEKKMRYFPNAISFSSKKSGNLETLKDKYIDLTVYPKRTLAVKRVFSLENKQMENRIHLPRYTVLKIKEIKISGPGSLV
ILSLEDWHGSLYETEVDLKYDVIVKNENYIEDLFGFGDIHQKYPAITDKHWAIIARGDLEEGMNTDECRLSIGDPVEIQL
KKDSRFETWFYNGKTLEFESGILQRFK
>Mature_427_residues
MRTIVLFLILFGCGSSHITAQNDYLVTTISNQEGPLSEEEQFIKENFPLQLLCKWTPGMKFMFIPSGRDMFLPTLLVYET
EKGADNSVLKHKILTFAGYEEKSQELSNDMSYSTRLIFECDGEKYYYEIKNTRPDEICEKNPRAYINGLVNLKDVDTAKE
LLTGRKIYVQSDMARVDDANSYSGYRKVSIPVNTEATITAIGVGSQSYPVKIIFQDSQGHSYYLEVALSRTNSGMDVSDF
QAEKKMRYFPNAISFSSKKSGNLETLKDKYIDLTVYPKRTLAVKRVFSLENKQMENRIHLPRYTVLKIKEIKISGPGSLV
ILSLEDWHGSLYETEVDLKYDVIVKNENYIEDLFGFGDIHQKYPAITDKHWAIIARGDLEEGMNTDECRLSIGDPVEIQL
KKDSRFETWFYNGKTLEFESGILQRFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49038; Mature: 49038

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIVLFLILFGCGSSHITAQNDYLVTTISNQEGPLSEEEQFIKENFPLQLLCKWTPGMK
CHHHEEEHHHHHCCCCCEEECCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCE
FMFIPSGRDMFLPTLLVYETEKGADNSVLKHKILTFAGYEEKSQELSNDMSYSTRLIFEC
EEEEECCCCEECCEEEEEECCCCCCCHHHHHEEEEEECCCHHHHHHHCCCCCCEEEEEEE
DGEKYYYEIKNTRPDEICEKNPRAYINGLVNLKDVDTAKELLTGRKIYVQSDMARVDDAN
CCCEEEEEECCCCHHHHHHCCCCEEEEEEEEECCCHHHHHHHCCCEEEEECCHHHCCCCC
SYSGYRKVSIPVNTEATITAIGVGSQSYPVKIIFQDSQGHSYYLEVALSRTNSGMDVSDF
CCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHH
QAEKKMRYFPNAISFSSKKSGNLETLKDKYIDLTVYPKRTLAVKRVFSLENKQMENRIHL
HHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEEEEEECCHHHHHHHHHHHCCHHHHCEECC
PRYTVLKIKEIKISGPGSLVILSLEDWHGSLYETEVDLKYDVIVKNENYIEDLFGFGDIH
CCEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEECEEEEEEECCCCHHHHHHCCCCHH
QKYPAITDKHWAIIARGDLEEGMNTDECRLSIGDPVEIQLKKDSRFETWFYNGKTLEFES
HHCCCCCCCCEEEEECCCHHHCCCCCCEEEECCCCEEEEEECCCCEEEEEECCEEEEECH
GILQRFK
HHHHHCC
>Mature Secondary Structure
MRTIVLFLILFGCGSSHITAQNDYLVTTISNQEGPLSEEEQFIKENFPLQLLCKWTPGMK
CHHHEEEHHHHHCCCCCEEECCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCE
FMFIPSGRDMFLPTLLVYETEKGADNSVLKHKILTFAGYEEKSQELSNDMSYSTRLIFEC
EEEEECCCCEECCEEEEEECCCCCCCHHHHHEEEEEECCCHHHHHHHCCCCCCEEEEEEE
DGEKYYYEIKNTRPDEICEKNPRAYINGLVNLKDVDTAKELLTGRKIYVQSDMARVDDAN
CCCEEEEEECCCCHHHHHHCCCCEEEEEEEEECCCHHHHHHHCCCEEEEECCHHHCCCCC
SYSGYRKVSIPVNTEATITAIGVGSQSYPVKIIFQDSQGHSYYLEVALSRTNSGMDVSDF
CCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHH
QAEKKMRYFPNAISFSSKKSGNLETLKDKYIDLTVYPKRTLAVKRVFSLENKQMENRIHL
HHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEEEEEECCHHHHHHHHHHHCCHHHHCEECC
PRYTVLKIKEIKISGPGSLVILSLEDWHGSLYETEVDLKYDVIVKNENYIEDLFGFGDIH
CCEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEECEEEEEEECCCCHHHHHHCCCCHH
QKYPAITDKHWAIIARGDLEEGMNTDECRLSIGDPVEIQLKKDSRFETWFYNGKTLEFES
HHCCCCCCCCEEEEECCCHHHCCCCCCEEEECCCCEEEEEECCCCEEEEEECCEEEEECH
GILQRFK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA