| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is bcp [H]
Identifier: 29350019
GI number: 29350019
Start: 6036716
End: 6037171
Strand: Reverse
Name: bcp [H]
Synonym: BT_4611
Alternate gene names: 29350019
Gene position: 6037171-6036716 (Counterclockwise)
Preceding gene: 29350020
Following gene: 29350018
Centisome position: 96.43
GC content: 41.67
Gene sequence:
>456_bases ATGAAGAATATAGGAGATAAAGCACCGGAAGTATTAGGCATCAATGAAAAAGGTGAAGAGATCCGACTGAGTGCTTATAA AGGAAAAAAGATAGTACTGTATTTCTATCCGAAAGACAGTACATCGGGGTGCACGGCACAGGCATGCAGTCTGCGTGACA ACTATTCCGAACTGCGCAAAGCCGGTTACGAAGTAATCGGTGTCAGCGTAGACAGCGAGAAGTCGCACCAAAAATTCATC GATAAGAATAATCTTCCTTTTACACTGATAGCCGATACGGACAAAAAGTTGGTAGAAGAATTTGGTGTATGGGGAGAGAA AAAGTTGTATGGACGTGCCTATATGGGAACCTTCCGCACTACTTTCCTGATCAATGAAGAAGGAATCATAGAACGGATTA TCACTCCCAAAGAAGTGAAAACCAAAGAGCATGCCTCACAGATTTTAAATCAATAA
Upstream 100 bases:
>100_bases AATTTAATCCGGATCCGTTCATGGAACAGCTCAATAAGCAGGGACTGCCTTGGCATGAAGTGTTTGATAAAGACCTAGAA CTATAATAGAACGAATCAGA
Downstream 100 bases:
>100_bases ATCCATTAATTATAAGAATAAGGTATGGCAAAGAAAGACGAACTTAATTTTGAAACAGATAATAAAATGGCATCAAGCGA AAAACTGAAAGCCTTACAGG
Product: putative bacterioferritin co-migratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKNIGDKAPEVLGINEKGEEIRLSAYKGKKIVLYFYPKDSTSGCTAQACSLRDNYSELRKAGYEVIGVSVDSEKSHQKFI DKNNLPFTLIADTDKKLVEEFGVWGEKKLYGRAYMGTFRTTFLINEEGIIERIITPKEVKTKEHASQILNQ
Sequences:
>Translated_151_residues MKNIGDKAPEVLGINEKGEEIRLSAYKGKKIVLYFYPKDSTSGCTAQACSLRDNYSELRKAGYEVIGVSVDSEKSHQKFI DKNNLPFTLIADTDKKLVEEFGVWGEKKLYGRAYMGTFRTTFLINEEGIIERIITPKEVKTKEHASQILNQ >Mature_151_residues MKNIGDKAPEVLGINEKGEEIRLSAYKGKKIVLYFYPKDSTSGCTAQACSLRDNYSELRKAGYEVIGVSVDSEKSHQKFI DKNNLPFTLIADTDKKLVEEFGVWGEKKLYGRAYMGTFRTTFLINEEGIIERIITPKEVKTKEHASQILNQ
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI32189392, Length=142, Percent_Identity=35.2112676056338, Blast_Score=77, Evalue=7e-15, Organism=Homo sapiens, GI4505591, Length=144, Percent_Identity=31.25, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI32455266, Length=144, Percent_Identity=31.25, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI32455264, Length=144, Percent_Identity=31.25, Blast_Score=68, Evalue=3e-12, Organism=Escherichia coli, GI1788825, Length=146, Percent_Identity=43.8356164383562, Blast_Score=142, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6322180, Length=122, Percent_Identity=38.5245901639344, Blast_Score=86, Evalue=2e-18, Organism=Drosophila melanogaster, GI24656348, Length=140, Percent_Identity=32.1428571428571, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI17864676, Length=140, Percent_Identity=32.1428571428571, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI17157991, Length=143, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641739, Length=143, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI17738015, Length=139, Percent_Identity=30.2158273381295, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17115; Mature: 17115
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIGDKAPEVLGINEKGEEIRLSAYKGKKIVLYFYPKDSTSGCTAQACSLRDNYSELRK CCCCCCCCCCEEECCCCCCEEEEEEECCCEEEEEEECCCCCCCCCHHHHHCCCCHHHHHH AGYEVIGVSVDSEKSHQKFIDKNNLPFTLIADTDKKLVEEFGVWGEKKLYGRAYMGTFRT CCCEEEEEEECCCHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHCCEEE TFLINEEGIIERIITPKEVKTKEHASQILNQ EEEECCCCHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKNIGDKAPEVLGINEKGEEIRLSAYKGKKIVLYFYPKDSTSGCTAQACSLRDNYSELRK CCCCCCCCCCEEECCCCCCEEEEEEECCCEEEEEEECCCCCCCCCHHHHHCCCCHHHHHH AGYEVIGVSVDSEKSHQKFIDKNNLPFTLIADTDKKLVEEFGVWGEKKLYGRAYMGTFRT CCCEEEEEEECCCHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHCCEEE TFLINEEGIIERIITPKEVKTKEHASQILNQ EEEECCCCHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]