| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349933
Identifier: 29349933
GI number: 29349933
Start: 5944019
End: 5944303
Strand: Reverse
Name: 29349933
Synonym: BT_4525
Alternate gene names: NA
Gene position: 5944303-5944019 (Counterclockwise)
Preceding gene: 29349934
Following gene: 29349932
Centisome position: 94.95
GC content: 35.79
Gene sequence:
>285_bases ATGAAATGCTATGCAAAATCTTCCGAAAACCTCATAGTACAGCTGGCAAATTTGCCCCCAAAACCACCTTTTTTATCAAA GTCTTTTCATTTGTTTTCCTGTACCGGAAAAACGCATTATCTTTGCATCAGTTCAGCGAAGAATAAAGAGCAAAATAAGA CTTTCCTACCGTTTAATTTTCAAAACATTGGTAGACAATTAGTCCAATATGCTGCATCGGAAAGTAAGTGGTGGTTACCA ACAATTAGCATCTATCATCAACGATTATTAAGGCGTTCATTTTGA
Upstream 100 bases:
>100_bases CCTACTGGGTATTTTTTCTTTTCGCCAGCAATCAATATCAGTCACTCCGTGTTCAATCTTGGAGGAGCAACCAGCAATAT AGACATAGGCATAACACTAG
Downstream 100 bases:
>100_bases GCGCCTTTCTTTTTAGCCTTATAAGCGATGGTTATCGTTTATAGGGCTTTTTCAGCTCATTTTTGTACCGTATTTGTTGC TCGCTTGTTACTCTCCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MKCYAKSSENLIVQLANLPPKPPFLSKSFHLFSCTGKTHYLCISSAKNKEQNKTFLPFNFQNIGRQLVQYAASESKWWLP TISIYHQRLLRRSF
Sequences:
>Translated_94_residues MKCYAKSSENLIVQLANLPPKPPFLSKSFHLFSCTGKTHYLCISSAKNKEQNKTFLPFNFQNIGRQLVQYAASESKWWLP TISIYHQRLLRRSF >Mature_94_residues MKCYAKSSENLIVQLANLPPKPPFLSKSFHLFSCTGKTHYLCISSAKNKEQNKTFLPFNFQNIGRQLVQYAASESKWWLP TISIYHQRLLRRSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10968; Mature: 10968
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCYAKSSENLIVQLANLPPKPPFLSKSFHLFSCTGKTHYLCISSAKNKEQNKTFLPFNF CCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCH QNIGRQLVQYAASESKWWLPTISIYHQRLLRRSF HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKCYAKSSENLIVQLANLPPKPPFLSKSFHLFSCTGKTHYLCISSAKNKEQNKTFLPFNF CCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCH QNIGRQLVQYAASESKWWLPTISIYHQRLLRRSF HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA