Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349922

Identifier: 29349922

GI number: 29349922

Start: 5930704

End: 5931522

Strand: Reverse

Name: 29349922

Synonym: BT_4514

Alternate gene names: NA

Gene position: 5931522-5930704 (Counterclockwise)

Preceding gene: 29349929

Following gene: 29349919

Centisome position: 94.75

GC content: 41.27

Gene sequence:

>819_bases
ATGTATCTGACAAGTATGACTCACGAGGAACTGTATGCCGAAGTGCATAAGGACCTCATCGAAATATCGACCAAAGCAAA
TATGTTCATGGATAAGGTTCGTAAGAAAACAAAGAACATGCTGCCATATCCTTTGGCGACCCAGCGTATAACCCTCACCA
CCACCCGAAGAAATGTGTGGACAGTAGTGGGAAAACATAATTCATATATGCAAGGCGTAGGATTTCAGGCTTATGCCCCC
ATTATCGGCACTTCAAGCAATGGCTATATCCAAATGACGGGGTTCAAGTCCCGCGATAGGGTGATGCATTACACAGCACA
TTTCATGCAACGATATAAAGAGCGCTACATCGATCATTATCAAATAGACCGCAAAGGGGAAAACATATTCGAATACTTTG
TGTATAACAATCCGCAAGTCTTGTATACTCGCAAAAATAATGGCGGCTATTTCATCGTTTCCGACCATGGTATCGCTGTA
GCCGATTTCAGCGAAGGACTAAAATTCATGACCCATGTCACTTTTCTGGGAGATGATGAACTGACGCTAAAGAAACAGCT
CATCTATGATGAGGAAATCAAAATCTACAAAGGGGCACTTGAGCTGAAACGGTTAAAATCAAGAAAACAAAAGGATGATC
TCGTCACGATTTGGAATGTTGCCAAGAAGCATAATGCAGGTATTGAGATGGTAAAACGATGGTACCAATGGAATGGAGTA
AAAGTGGATGAAGATTATCTTCAACAATGCATTGATCTCATTGAGAAATATAATGTCCAGTCACTCGATCAATTTGCGGA
ACTTATGTCCCGACAATAA

Upstream 100 bases:

>100_bases
ATAAAGTATTTATTTTCGGCATCATCCGCAAAAAGCCATCCGACAATGATGTCAATTCTGAAGATAACCACTACCTTTGT
CTCAATTCAAAAACACAAAT

Downstream 100 bases:

>100_bases
AAAGGATCCTTATGAGAACTATCGAGCACGAAGCTGCCAGAAAGCTACGGCAGCCGCAGCGGCTACATTGAGTGAATCGA
CGCCGTGCGACATAGGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MYLTSMTHEELYAEVHKDLIEISTKANMFMDKVRKKTKNMLPYPLATQRITLTTTRRNVWTVVGKHNSYMQGVGFQAYAP
IIGTSSNGYIQMTGFKSRDRVMHYTAHFMQRYKERYIDHYQIDRKGENIFEYFVYNNPQVLYTRKNNGGYFIVSDHGIAV
ADFSEGLKFMTHVTFLGDDELTLKKQLIYDEEIKIYKGALELKRLKSRKQKDDLVTIWNVAKKHNAGIEMVKRWYQWNGV
KVDEDYLQQCIDLIEKYNVQSLDQFAELMSRQ

Sequences:

>Translated_272_residues
MYLTSMTHEELYAEVHKDLIEISTKANMFMDKVRKKTKNMLPYPLATQRITLTTTRRNVWTVVGKHNSYMQGVGFQAYAP
IIGTSSNGYIQMTGFKSRDRVMHYTAHFMQRYKERYIDHYQIDRKGENIFEYFVYNNPQVLYTRKNNGGYFIVSDHGIAV
ADFSEGLKFMTHVTFLGDDELTLKKQLIYDEEIKIYKGALELKRLKSRKQKDDLVTIWNVAKKHNAGIEMVKRWYQWNGV
KVDEDYLQQCIDLIEKYNVQSLDQFAELMSRQ
>Mature_272_residues
MYLTSMTHEELYAEVHKDLIEISTKANMFMDKVRKKTKNMLPYPLATQRITLTTTRRNVWTVVGKHNSYMQGVGFQAYAP
IIGTSSNGYIQMTGFKSRDRVMHYTAHFMQRYKERYIDHYQIDRKGENIFEYFVYNNPQVLYTRKNNGGYFIVSDHGIAV
ADFSEGLKFMTHVTFLGDDELTLKKQLIYDEEIKIYKGALELKRLKSRKQKDDLVTIWNVAKKHNAGIEMVKRWYQWNGV
KVDEDYLQQCIDLIEKYNVQSLDQFAELMSRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32171; Mature: 32171

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLTSMTHEELYAEVHKDLIEISTKANMFMDKVRKKTKNMLPYPLATQRITLTTTRRNVW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEE
TVVGKHNSYMQGVGFQAYAPIIGTSSNGYIQMTGFKSRDRVMHYTAHFMQRYKERYIDHY
EEEECCCCHHHCCCCEEECCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCE
QIDRKGENIFEYFVYNNPQVLYTRKNNGGYFIVSDHGIAVADFSEGLKFMTHVTFLGDDE
EECCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHEEEECCCC
LTLKKQLIYDEEIKIYKGALELKRLKSRKQKDDLVTIWNVAKKHNAGIEMVKRWYQWNGV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHCCCE
KVDEDYLQQCIDLIEKYNVQSLDQFAELMSRQ
EECHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MYLTSMTHEELYAEVHKDLIEISTKANMFMDKVRKKTKNMLPYPLATQRITLTTTRRNVW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEE
TVVGKHNSYMQGVGFQAYAPIIGTSSNGYIQMTGFKSRDRVMHYTAHFMQRYKERYIDHY
EEEECCCCHHHCCCCEEECCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCE
QIDRKGENIFEYFVYNNPQVLYTRKNNGGYFIVSDHGIAVADFSEGLKFMTHVTFLGDDE
EECCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHEEEECCCC
LTLKKQLIYDEEIKIYKGALELKRLKSRKQKDDLVTIWNVAKKHNAGIEMVKRWYQWNGV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHCCCE
KVDEDYLQQCIDLIEKYNVQSLDQFAELMSRQ
EECHHHHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA