| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29349922
Identifier: 29349922
GI number: 29349922
Start: 5930704
End: 5931522
Strand: Reverse
Name: 29349922
Synonym: BT_4514
Alternate gene names: NA
Gene position: 5931522-5930704 (Counterclockwise)
Preceding gene: 29349929
Following gene: 29349919
Centisome position: 94.75
GC content: 41.27
Gene sequence:
>819_bases ATGTATCTGACAAGTATGACTCACGAGGAACTGTATGCCGAAGTGCATAAGGACCTCATCGAAATATCGACCAAAGCAAA TATGTTCATGGATAAGGTTCGTAAGAAAACAAAGAACATGCTGCCATATCCTTTGGCGACCCAGCGTATAACCCTCACCA CCACCCGAAGAAATGTGTGGACAGTAGTGGGAAAACATAATTCATATATGCAAGGCGTAGGATTTCAGGCTTATGCCCCC ATTATCGGCACTTCAAGCAATGGCTATATCCAAATGACGGGGTTCAAGTCCCGCGATAGGGTGATGCATTACACAGCACA TTTCATGCAACGATATAAAGAGCGCTACATCGATCATTATCAAATAGACCGCAAAGGGGAAAACATATTCGAATACTTTG TGTATAACAATCCGCAAGTCTTGTATACTCGCAAAAATAATGGCGGCTATTTCATCGTTTCCGACCATGGTATCGCTGTA GCCGATTTCAGCGAAGGACTAAAATTCATGACCCATGTCACTTTTCTGGGAGATGATGAACTGACGCTAAAGAAACAGCT CATCTATGATGAGGAAATCAAAATCTACAAAGGGGCACTTGAGCTGAAACGGTTAAAATCAAGAAAACAAAAGGATGATC TCGTCACGATTTGGAATGTTGCCAAGAAGCATAATGCAGGTATTGAGATGGTAAAACGATGGTACCAATGGAATGGAGTA AAAGTGGATGAAGATTATCTTCAACAATGCATTGATCTCATTGAGAAATATAATGTCCAGTCACTCGATCAATTTGCGGA ACTTATGTCCCGACAATAA
Upstream 100 bases:
>100_bases ATAAAGTATTTATTTTCGGCATCATCCGCAAAAAGCCATCCGACAATGATGTCAATTCTGAAGATAACCACTACCTTTGT CTCAATTCAAAAACACAAAT
Downstream 100 bases:
>100_bases AAAGGATCCTTATGAGAACTATCGAGCACGAAGCTGCCAGAAAGCTACGGCAGCCGCAGCGGCTACATTGAGTGAATCGA CGCCGTGCGACATAGGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MYLTSMTHEELYAEVHKDLIEISTKANMFMDKVRKKTKNMLPYPLATQRITLTTTRRNVWTVVGKHNSYMQGVGFQAYAP IIGTSSNGYIQMTGFKSRDRVMHYTAHFMQRYKERYIDHYQIDRKGENIFEYFVYNNPQVLYTRKNNGGYFIVSDHGIAV ADFSEGLKFMTHVTFLGDDELTLKKQLIYDEEIKIYKGALELKRLKSRKQKDDLVTIWNVAKKHNAGIEMVKRWYQWNGV KVDEDYLQQCIDLIEKYNVQSLDQFAELMSRQ
Sequences:
>Translated_272_residues MYLTSMTHEELYAEVHKDLIEISTKANMFMDKVRKKTKNMLPYPLATQRITLTTTRRNVWTVVGKHNSYMQGVGFQAYAP IIGTSSNGYIQMTGFKSRDRVMHYTAHFMQRYKERYIDHYQIDRKGENIFEYFVYNNPQVLYTRKNNGGYFIVSDHGIAV ADFSEGLKFMTHVTFLGDDELTLKKQLIYDEEIKIYKGALELKRLKSRKQKDDLVTIWNVAKKHNAGIEMVKRWYQWNGV KVDEDYLQQCIDLIEKYNVQSLDQFAELMSRQ >Mature_272_residues MYLTSMTHEELYAEVHKDLIEISTKANMFMDKVRKKTKNMLPYPLATQRITLTTTRRNVWTVVGKHNSYMQGVGFQAYAP IIGTSSNGYIQMTGFKSRDRVMHYTAHFMQRYKERYIDHYQIDRKGENIFEYFVYNNPQVLYTRKNNGGYFIVSDHGIAV ADFSEGLKFMTHVTFLGDDELTLKKQLIYDEEIKIYKGALELKRLKSRKQKDDLVTIWNVAKKHNAGIEMVKRWYQWNGV KVDEDYLQQCIDLIEKYNVQSLDQFAELMSRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32171; Mature: 32171
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLTSMTHEELYAEVHKDLIEISTKANMFMDKVRKKTKNMLPYPLATQRITLTTTRRNVW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEE TVVGKHNSYMQGVGFQAYAPIIGTSSNGYIQMTGFKSRDRVMHYTAHFMQRYKERYIDHY EEEECCCCHHHCCCCEEECCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCE QIDRKGENIFEYFVYNNPQVLYTRKNNGGYFIVSDHGIAVADFSEGLKFMTHVTFLGDDE EECCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHEEEECCCC LTLKKQLIYDEEIKIYKGALELKRLKSRKQKDDLVTIWNVAKKHNAGIEMVKRWYQWNGV HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHCCCE KVDEDYLQQCIDLIEKYNVQSLDQFAELMSRQ EECHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MYLTSMTHEELYAEVHKDLIEISTKANMFMDKVRKKTKNMLPYPLATQRITLTTTRRNVW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEE TVVGKHNSYMQGVGFQAYAPIIGTSSNGYIQMTGFKSRDRVMHYTAHFMQRYKERYIDHY EEEECCCCHHHCCCCEEECCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCE QIDRKGENIFEYFVYNNPQVLYTRKNNGGYFIVSDHGIAVADFSEGLKFMTHVTFLGDDE EECCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHEEEECCCC LTLKKQLIYDEEIKIYKGALELKRLKSRKQKDDLVTIWNVAKKHNAGIEMVKRWYQWNGV HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHCCCE KVDEDYLQQCIDLIEKYNVQSLDQFAELMSRQ EECHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA