| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yyaH [H]
Identifier: 29349914
GI number: 29349914
Start: 5920672
End: 5922048
Strand: Reverse
Name: yyaH [H]
Synonym: BT_4506
Alternate gene names: 29349914
Gene position: 5922048-5920672 (Counterclockwise)
Preceding gene: 29349915
Following gene: 29349913
Centisome position: 94.6
GC content: 48.15
Gene sequence:
>1377_bases ATGAAGCTACATCATATCGCCATCTGGACTTTCCGTCTGGAAGAATTAAAAGATTTCTATGTCCGCTTTCTGGGCGGGAC AAGTAATGAGAAATATATCAATCCCAAGAAGGGATTCGAATCATACTTTATCTCTTTTGATGAAGGTCCCACTCTGGAGT TGATGAGTCGGGCAGATGTGCAGAATACCCCGATAGAGGAAAACAGGCGGGGACTGACACATCTTGCGTTCACATTTCCC AGCAAGGAGGAGATTCTTCGCTTTACGGAAGAAATGCGCTCCGAGGGGTATACCATAGTAGGTGAACCACGCACTTCGGG CGACGGATACTTTGAGAGCGTTGTACTCGACCCCGACGGAAATCGTTTGGAATGTGTATACAAGAAAGAACCGGAAGCAG AAAGAACCGAAGCGGCTCTATGCCCGAATATCGAAACGAAACGTCTGCTGCTGCGCCCTTTTCAGGAGAATGACGCAGAA GCATTCTTTGCCTGTTGCCAGAACCCCAATTTGGGGAATAATGCCGGATGGGCTCCCCACAAGACGTTGAATGAATCCCG TGAAATCCTTCACGGCGCATTTATAGGACAGGAAGGTATATGGGCTGTTACATTAAAAGATACACAGCAATTGATAGCTT CCATCGGCATCGTACCCGATCCGAAACGGGAAAATCCTCAGGTACGTATGCTGGGATATTGGCTGGACGAACCGTATTGG GGAAAAGGATACATGTCGGAAGCAGTGCAAGCCGTGCTCAACTATGGCTTCAACGAACTACAGCTCAGCCTCATCACTGC CAACTGTTATCCGCACAACAAACGTTCGCAACAAGTGCTGAAGCGAAACGGATTTATCTACGAAGGTACACTTCATCAGG CAGAACTGACCTATAACGGGAATATATATGATCATGAATGTTACTACATTCCCAATATAGCACGCCCCACCGAACAGGAT TATGATGAACTGATCCAGCTGTGGGAGAAGTCTGTCCGCTCCACGCACCACTTCCTGACAGAAGAGAGTATCCAGTTCTA TAAGCCACTGATACGCAACCACTATCTGCCGGCAGTAGAGCTCTCCATCATCCGCAACTCTCACGGAAAGATTGCCGCAT TCATGGGATTGAGTGATGAGCTGATCGAGATGCTGTTTGTACACCCCGACGAACAGGGAAAGGGATACGGAAAGCGATTG ATAGAGTATGCCATCCGCCAGAAGCAGATCGACAAGGTGGATGTGAACGAAGACAACGACCAGGCTCTCCGGTTCTATCA GCATCTGGGATTCGAGATCATCGGACGGGATGAAACGGACAGTATGGGCAAGCCGTATCCAATCTTGCACTTACAACTGA CCGACGATAAAAAATAA
Upstream 100 bases:
>100_bases TCAGGAGAACAGTAAAATCATTGCGGACATCTCACGTATCGTTTACGAATATGTGACGCATCAATAAAATAGAAGTATAA CAACATTAACTACGATTCTT
Downstream 100 bases:
>100_bases GATACTGAACCCAAAATAGAAATGGACTTACGCACACAACTGGCCACTCGCTTCCATATAGAAAATATACGGGAACTGCT TCATTATATAAAAGAAGACG
Product: putative acetyltransferase
Products: NA
Alternate protein names: ORFF [H]
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MKLHHIAIWTFRLEELKDFYVRFLGGTSNEKYINPKKGFESYFISFDEGPTLELMSRADVQNTPIEENRRGLTHLAFTFP SKEEILRFTEEMRSEGYTIVGEPRTSGDGYFESVVLDPDGNRLECVYKKEPEAERTEAALCPNIETKRLLLRPFQENDAE AFFACCQNPNLGNNAGWAPHKTLNESREILHGAFIGQEGIWAVTLKDTQQLIASIGIVPDPKRENPQVRMLGYWLDEPYW GKGYMSEAVQAVLNYGFNELQLSLITANCYPHNKRSQQVLKRNGFIYEGTLHQAELTYNGNIYDHECYYIPNIARPTEQD YDELIQLWEKSVRSTHHFLTEESIQFYKPLIRNHYLPAVELSIIRNSHGKIAAFMGLSDELIEMLFVHPDEQGKGYGKRL IEYAIRQKQIDKVDVNEDNDQALRFYQHLGFEIIGRDETDSMGKPYPILHLQLTDDKK
Sequences:
>Translated_458_residues MKLHHIAIWTFRLEELKDFYVRFLGGTSNEKYINPKKGFESYFISFDEGPTLELMSRADVQNTPIEENRRGLTHLAFTFP SKEEILRFTEEMRSEGYTIVGEPRTSGDGYFESVVLDPDGNRLECVYKKEPEAERTEAALCPNIETKRLLLRPFQENDAE AFFACCQNPNLGNNAGWAPHKTLNESREILHGAFIGQEGIWAVTLKDTQQLIASIGIVPDPKRENPQVRMLGYWLDEPYW GKGYMSEAVQAVLNYGFNELQLSLITANCYPHNKRSQQVLKRNGFIYEGTLHQAELTYNGNIYDHECYYIPNIARPTEQD YDELIQLWEKSVRSTHHFLTEESIQFYKPLIRNHYLPAVELSIIRNSHGKIAAFMGLSDELIEMLFVHPDEQGKGYGKRL IEYAIRQKQIDKVDVNEDNDQALRFYQHLGFEIIGRDETDSMGKPYPILHLQLTDDKK >Mature_458_residues MKLHHIAIWTFRLEELKDFYVRFLGGTSNEKYINPKKGFESYFISFDEGPTLELMSRADVQNTPIEENRRGLTHLAFTFP SKEEILRFTEEMRSEGYTIVGEPRTSGDGYFESVVLDPDGNRLECVYKKEPEAERTEAALCPNIETKRLLLRPFQENDAE AFFACCQNPNLGNNAGWAPHKTLNESREILHGAFIGQEGIWAVTLKDTQQLIASIGIVPDPKRENPQVRMLGYWLDEPYW GKGYMSEAVQAVLNYGFNELQLSLITANCYPHNKRSQQVLKRNGFIYEGTLHQAELTYNGNIYDHECYYIPNIARPTEQD YDELIQLWEKSVRSTHHFLTEESIQFYKPLIRNHYLPAVELSIIRNSHGKIAAFMGLSDELIEMLFVHPDEQGKGYGKRL IEYAIRQKQIDKVDVNEDNDQALRFYQHLGFEIIGRDETDSMGKPYPILHLQLTDDKK
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790442, Length=140, Percent_Identity=37.8571428571429, Blast_Score=107, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: 2.3.1.-
Molecular weight: Translated: 53050; Mature: 53050
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHHIAIWTFRLEELKDFYVRFLGGTSNEKYINPKKGFESYFISFDEGPTLELMSRADV CCEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCC QNTPIEENRRGLTHLAFTFPSKEEILRFTEEMRSEGYTIVGEPRTSGDGYFESVVLDPDG CCCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCC NRLECVYKKEPEAERTEAALCPNIETKRLLLRPFQENDAEAFFACCQNPNLGNNAGWAPH CEEEEEECCCCCHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC KTLNESREILHGAFIGQEGIWAVTLKDTQQLIASIGIVPDPKRENPQVRMLGYWLDEPYW HHHHHHHHHHHHHEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCC GKGYMSEAVQAVLNYGFNELQLSLITANCYPHNKRSQQVLKRNGFIYEGTLHQAELTYNG CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCEEECCEEEEEEEECC NIYDHECYYIPNIARPTEQDYDELIQLWEKSVRSTHHFLTEESIQFYKPLIRNHYLPAVE CEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LSIIRNSHGKIAAFMGLSDELIEMLFVHPDEQGKGYGKRLIEYAIRQKQIDKVDVNEDND EEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH QALRFYQHLGFEIIGRDETDSMGKPYPILHLQLTDDKK HHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MKLHHIAIWTFRLEELKDFYVRFLGGTSNEKYINPKKGFESYFISFDEGPTLELMSRADV CCEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCC QNTPIEENRRGLTHLAFTFPSKEEILRFTEEMRSEGYTIVGEPRTSGDGYFESVVLDPDG CCCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCC NRLECVYKKEPEAERTEAALCPNIETKRLLLRPFQENDAEAFFACCQNPNLGNNAGWAPH CEEEEEECCCCCHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC KTLNESREILHGAFIGQEGIWAVTLKDTQQLIASIGIVPDPKRENPQVRMLGYWLDEPYW HHHHHHHHHHHHHEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCC GKGYMSEAVQAVLNYGFNELQLSLITANCYPHNKRSQQVLKRNGFIYEGTLHQAELTYNG CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCEEECCEEEEEEEECC NIYDHECYYIPNIARPTEQDYDELIQLWEKSVRSTHHFLTEESIQFYKPLIRNHYLPAVE CEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LSIIRNSHGKIAAFMGLSDELIEMLFVHPDEQGKGYGKRLIEYAIRQKQIDKVDVNEDND EEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH QALRFYQHLGFEIIGRDETDSMGKPYPILHLQLTDDKK HHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]