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The map label for this gene is yhiD [H]

Identifier: 29349892

GI number: 29349892

Start: 5901239

End: 5901847

Strand: Reverse

Name: yhiD [H]

Synonym: BT_4484

Alternate gene names: 29349892

Gene position: 5901847-5901239 (Counterclockwise)

Preceding gene: 29349894

Following gene: 29349886

Centisome position: 94.27

GC content: 47.13

Gene sequence:

>609_bases
ATGTTAAGATTACTGGTGGCAGGAATACTGGGAGCCATCATCGGACTGGACCGTGAATATCGTGCCAAAGAAGCCGGATA
CCGCACTCACTTCCTCGTATCATTGGGTAGTGCCCTGATCATGATCGTTTCGCAATACGGATTTCAAGAGATCATCAAAG
AAAACAGTGTGACGCTCGACCCCAGCCGTGTAGCGGCACAAGTAGTCAGCGGCATCGGATTCATCGGTGCAGGAACCATT
ATCCTACAGAAACAAATCGTCCGTGGACTGACCACAGCCGCCGGCATATGGGCTACAGCCGGCATCGGTCTGGCAGTCGG
CGCGGGAATGTACACCATCGGCATAGCCACTACCGTACTGACTCTGATCGGCCTGGAACTACTCAGTTACATCTTCAAGA
GTGTAGGCATGAAAAGTTCGATGATCTCCTTCTCTACTAACAACAAAGACACCTTGAAACAGATAGCGGACAGATTTAAT
TCAAAAGATTATATGATTGTCTCTTACGAAATGGAAACACAGCATTCGGGTGAAATGGAATCCTATCAAGTCACACAATG
GTCATCAAATCAAAACGGAACAATGATGAAGGACATTTACTTTCGTTGA

Upstream 100 bases:

>100_bases
ATTGTATATTTATAGGACTAACCGTTTTTAAAGAAAAAAACAGAAGAAACAAACAAAGAAAAGAAAGGAGACCGAACCTA
TGATGTTGAACGTTGATTTT

Downstream 100 bases:

>100_bases
TGCAGAAATTTCCGGATGTGACGGTGCAGCGGATAGAATAAGCCTACTTCTGCTTCTCCGTCAGATACTTCCAGTAGCGG
ACAGGCATATCCTTTTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLRLLVAGILGAIIGLDREYRAKEAGYRTHFLVSLGSALIMIVSQYGFQEIIKENSVTLDPSRVAAQVVSGIGFIGAGTI
ILQKQIVRGLTTAAGIWATAGIGLAVGAGMYTIGIATTVLTLIGLELLSYIFKSVGMKSSMISFSTNNKDTLKQIADRFN
SKDYMIVSYEMETQHSGEMESYQVTQWSSNQNGTMMKDIYFR

Sequences:

>Translated_202_residues
MLRLLVAGILGAIIGLDREYRAKEAGYRTHFLVSLGSALIMIVSQYGFQEIIKENSVTLDPSRVAAQVVSGIGFIGAGTI
ILQKQIVRGLTTAAGIWATAGIGLAVGAGMYTIGIATTVLTLIGLELLSYIFKSVGMKSSMISFSTNNKDTLKQIADRFN
SKDYMIVSYEMETQHSGEMESYQVTQWSSNQNGTMMKDIYFR
>Mature_202_residues
MLRLLVAGILGAIIGLDREYRAKEAGYRTHFLVSLGSALIMIVSQYGFQEIIKENSVTLDPSRVAAQVVSGIGFIGAGTI
ILQKQIVRGLTTAAGIWATAGIGLAVGAGMYTIGIATTVLTLIGLELLSYIFKSVGMKSSMISFSTNNKDTLKQIADRFN
SKDYMIVSYEMETQHSGEMESYQVTQWSSNQNGTMMKDIYFR

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=162, Percent_Identity=45.679012345679, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 22029; Mature: 22029

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLLVAGILGAIIGLDREYRAKEAGYRTHFLVSLGSALIMIVSQYGFQEIIKENSVTLD
CHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PSRVAAQVVSGIGFIGAGTIILQKQIVRGLTTAAGIWATAGIGLAVGAGMYTIGIATTVL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
TLIGLELLSYIFKSVGMKSSMISFSTNNKDTLKQIADRFNSKDYMIVSYEMETQHSGEME
HHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
SYQVTQWSSNQNGTMMKDIYFR
CEEEEECCCCCCCCCHHHCCCC
>Mature Secondary Structure
MLRLLVAGILGAIIGLDREYRAKEAGYRTHFLVSLGSALIMIVSQYGFQEIIKENSVTLD
CHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PSRVAAQVVSGIGFIGAGTIILQKQIVRGLTTAAGIWATAGIGLAVGAGMYTIGIATTVL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
TLIGLELLSYIFKSVGMKSSMISFSTNNKDTLKQIADRFNSKDYMIVSYEMETQHSGEME
HHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
SYQVTQWSSNQNGTMMKDIYFR
CEEEEECCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]