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The map label for this gene is 29349885

Identifier: 29349885

GI number: 29349885

Start: 5890635

End: 5891282

Strand: Reverse

Name: 29349885

Synonym: BT_4477

Alternate gene names: NA

Gene position: 5891282-5890635 (Counterclockwise)

Preceding gene: 29349886

Following gene: 29349884

Centisome position: 94.1

GC content: 47.22

Gene sequence:

>648_bases
ATGAAAACGCTTACTGATACGGATCACATACATACTTTGATAGCTGAAGGAGAGCATCAGCAACAGGACTTCAAATTCGA
AATTTCCGACGCACGCAAGATTGCCAAAACGCTGTCGGCTTTTGCCAATACCGACGGAGGACGGCTATTGATCGGCGTGA
AAGACAATGGACGAATAGCCGGCGTACGATCTGAAGAGGAAAAATATATGATTGAAGCAGCCGCACAACTTTATTGCATC
CCGGAGATAGATTATACTTTACAAACATATATCGTGGAAGGCAAACAGGTATTAGTAGCCACCATCGAAGAGAATCCGCA
CAAGCCTGTCTATGCGAAAGACGAAAACGGAAAGCCTCTCGCCTATCTCCGCATCAAGGATGAGAATATACTGGCTACCC
CTATCCACCTGCGTGTATGGCAACAAAGTGGCAGCCCGCGGGGAGAACTGATCCGCTATACGGAACGCGAACAACTCCTG
CTCGACCTGCTGGAACAGGGAACGCTGCTTTCACTCAACCGGTATTGTCGGCAGACCGGTATTTCCCGACGTGCCGCCGA
ACATCTGCTTGCCAAATTTGTTCGGTATGATATAGTAGAGCCCGTATTCGAAAATCATAAATTTTATTTCCGAATGAAAA
ACGAGTGA

Upstream 100 bases:

>100_bases
TTCCCGAAATAAACGCATAAAAACAATATTTTTTTTGAATTTATCTGCGAAAATAAGCTAAAAAAAAGGCTTTTCACCAT
TTTTCCCTACCTTTGTAGCC

Downstream 100 bases:

>100_bases
TATATTACGATTTACTCTTTTCAAAAACCTAACTATGAACTTTATCAATGAAATAAATGATATACTCTGGACATACATCC
TGATTATCATGTTACTGGGC

Product: putative ATP-dependent DNA helicase

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; Divergent AAA Domain-Containing Protein; AAA-4 Family Protein

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKTLTDTDHIHTLIAEGEHQQQDFKFEISDARKIAKTLSAFANTDGGRLLIGVKDNGRIAGVRSEEEKYMIEAAAQLYCI
PEIDYTLQTYIVEGKQVLVATIEENPHKPVYAKDENGKPLAYLRIKDENILATPIHLRVWQQSGSPRGELIRYTEREQLL
LDLLEQGTLLSLNRYCRQTGISRRAAEHLLAKFVRYDIVEPVFENHKFYFRMKNE

Sequences:

>Translated_215_residues
MKTLTDTDHIHTLIAEGEHQQQDFKFEISDARKIAKTLSAFANTDGGRLLIGVKDNGRIAGVRSEEEKYMIEAAAQLYCI
PEIDYTLQTYIVEGKQVLVATIEENPHKPVYAKDENGKPLAYLRIKDENILATPIHLRVWQQSGSPRGELIRYTEREQLL
LDLLEQGTLLSLNRYCRQTGISRRAAEHLLAKFVRYDIVEPVFENHKFYFRMKNE
>Mature_215_residues
MKTLTDTDHIHTLIAEGEHQQQDFKFEISDARKIAKTLSAFANTDGGRLLIGVKDNGRIAGVRSEEEKYMIEAAAQLYCI
PEIDYTLQTYIVEGKQVLVATIEENPHKPVYAKDENGKPLAYLRIKDENILATPIHLRVWQQSGSPRGELIRYTEREQLL
LDLLEQGTLLSLNRYCRQTGISRRAAEHLLAKFVRYDIVEPVFENHKFYFRMKNE

Specific function: Unknown

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24807; Mature: 24807

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLTDTDHIHTLIAEGEHQQQDFKFEISDARKIAKTLSAFANTDGGRLLIGVKDNGRIA
CCCCCCCHHHHHEECCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE
GVRSEEEKYMIEAAAQLYCIPEIDYTLQTYIVEGKQVLVATIEENPHKPVYAKDENGKPL
EECCCHHHHHHHHHHHEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCEEEECCCCCEE
AYLRIKDENILATPIHLRVWQQSGSPRGELIRYTEREQLLLDLLEQGTLLSLNRYCRQTG
EEEEEECCCEEECCEEEEEEECCCCCHHHEEEECCHHHHHHHHHHCCCEEHHHHHHHHCC
ISRRAAEHLLAKFVRYDIVEPVFENHKFYFRMKNE
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
>Mature Secondary Structure
MKTLTDTDHIHTLIAEGEHQQQDFKFEISDARKIAKTLSAFANTDGGRLLIGVKDNGRIA
CCCCCCCHHHHHEECCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE
GVRSEEEKYMIEAAAQLYCIPEIDYTLQTYIVEGKQVLVATIEENPHKPVYAKDENGKPL
EECCCHHHHHHHHHHHEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCEEEECCCCCEE
AYLRIKDENILATPIHLRVWQQSGSPRGELIRYTEREQLLLDLLEQGTLLSLNRYCRQTG
EEEEEECCCEEECCEEEEEEECCCCCHHHEEEECCHHHHHHHHHHCCCEEHHHHHHHHCC
ISRRAAEHLLAKFVRYDIVEPVFENHKFYFRMKNE
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA