Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349839

Identifier: 29349839

GI number: 29349839

Start: 5838055

End: 5839854

Strand: Reverse

Name: 29349839

Synonym: BT_4431

Alternate gene names: NA

Gene position: 5839854-5838055 (Counterclockwise)

Preceding gene: 29349840

Following gene: 29349827

Centisome position: 93.28

GC content: 46.11

Gene sequence:

>1800_bases
ATGGAATACGATCGAATTTACTCCATCCGGAAAGGAGAATACTTTGCGGATGCGCTAAAACGTGCAGGAAAAGATTTTAT
TCCTACCAATTGCATCATCAACAAACTGCTGCCGGGACTGGGTGCCACGCACTGTGAACTCACAGCACCACGCAAATCCA
TTATCATCGAACCGAATGTACCCGTCATCGAGTCGAAAGCAAAGGTACATAAGAATGCACTTGCTGTCTATAAAGGTGTA
AGCATCCGGCAGATCGCCGACTTTCTGGAAGCAAACCGGGAGAAGGATTATAAACTACTGACTACCCCCGAAGGCTTCAA
CAAGATAAAGGAAGCCATGCAAACGGTGGATATAGATATGTATACCGAATGCTTCATCTTGTTTGATGAATGCGAGAAGC
TGGTACAGGACGTGCACTACCGTGACTCTATCCGCGAACCGATGAATGATTTCTTTCGTTTCCAGAACAAGGCACTGATT
TCCGCTACACCTATCGTACCCGAAAAGGACAGTCGTTTTGACGGTTTCATGCGGGTATTGATTCAGCCGGATTATGTCTA
TCGGCAGAAACTGAAACTGATTACTACCAACAATGTGCTGGAAACCCTGCAGGAAGTGATTGAAGCCAAGAGAGGAACTG
TCTGTATTTTCTGTAACAGTATAGATTCGATAGACAGCTTCTACCGGTTGATACCCGAACTAAGCAATGCCTGCACATTC
TGTAGCGAAGACGGACAATACAAGCTCTGGAAAGGAAACCGCCGCAAAAAGTCAATGATGATCACCGAACTGGAACGCTA
CAATTTCTTCACCTCCCGCTTCTACTCGGCGGTAGACATACTCTGCAAAAATCCGCCTCATGTGATTTTCGTCAGTGACT
TGTATGGTGCCGCGCAATCCGTTATTGACCCTGCCACCGAGGCAATCCAGATTATCGGACGTTTCCGGGGCGGAGTCAAC
AGTGTGACACACATCGCTTCTATCCGACCGGAACTGGAATGTATGTCTTCTTCTGAAATCGATCACTGGATTCAGGGAGC
TTCCACCATTTTCAACGGCTGGAAAGCGCAACTGGCACGAACTACCAACATAGGCGAACGCACCTTACTACAGGAAGCCA
TCGGAGAAAACTCTTACCTCCCTTATCTGGACGAAAACGGAAAGCCGGATTCGTTTCTGATAGCCAACTTCTATGAAAAG
GAACAAGTGAAACGCTTGTACACCTCTGCCGATCTGCTGCACCTTGCTTACGAGCAGACCGGATATTTTGTCTTCTCGCA
CGAAGAACGCCTGATGCCGGTTTCGGATAATGAACGCATGGCTATCCAGCATCGTCTGGCAAAGAAAAAACGGGCAGAAC
TGATCGTCCGGAAACTGGAAGAGATGGAAAAGATGAGCAAAGCTACCGACAAGAAAATACAGAAAAGGTATCAGCGTATG
TTGATGAATCTGATTACTTCTACCGCCGACAGGTATATATACGACTGTTTCTGCCGCTTCGGAGCGGAATTTGTAAGGGA
AGCCGATTATAATGAGAATAAATTGCGGACAGCACTAAATGTGAGTAGCGAGCATACGATTAAGAAGTCCGGACAAATGC
GGACATATATCCAACGTGCTTTTCCTGTGGGTGCTGAAATATCCGTGCAGGAAGCGAAAAGTATGCTCAGACAGGTATAT
AAAAAGATGGGATTAAACACGGGACGGGGCATAACGACGAAAGAACTGGAACAATATGCGGAAATAGAAAACAGCAGGAA
TCGCGAAGCCAGAATGATTAAAATACTGAAACACAAATAA

Upstream 100 bases:

>100_bases
GTAGTTTTTAAAGCGGACAAGAATCTAAAAAAACGTATTTCAGCTGCCGGATTTGAGAAGTACAATCCAAAGAAACACAA
TAAACGGAAATATTAATTGC

Downstream 100 bases:

>100_bases
ATGAAAGAAAAATGCAGTTTTGATCCGGAAAAAGACAAAAACATCCTATAGTTTTTTGCAAACTTATTTTAAAAACAAGT
CATTTTCAGGGGTAAACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MEYDRIYSIRKGEYFADALKRAGKDFIPTNCIINKLLPGLGATHCELTAPRKSIIIEPNVPVIESKAKVHKNALAVYKGV
SIRQIADFLEANREKDYKLLTTPEGFNKIKEAMQTVDIDMYTECFILFDECEKLVQDVHYRDSIREPMNDFFRFQNKALI
SATPIVPEKDSRFDGFMRVLIQPDYVYRQKLKLITTNNVLETLQEVIEAKRGTVCIFCNSIDSIDSFYRLIPELSNACTF
CSEDGQYKLWKGNRRKKSMMITELERYNFFTSRFYSAVDILCKNPPHVIFVSDLYGAAQSVIDPATEAIQIIGRFRGGVN
SVTHIASIRPELECMSSSEIDHWIQGASTIFNGWKAQLARTTNIGERTLLQEAIGENSYLPYLDENGKPDSFLIANFYEK
EQVKRLYTSADLLHLAYEQTGYFVFSHEERLMPVSDNERMAIQHRLAKKKRAELIVRKLEEMEKMSKATDKKIQKRYQRM
LMNLITSTADRYIYDCFCRFGAEFVREADYNENKLRTALNVSSEHTIKKSGQMRTYIQRAFPVGAEISVQEAKSMLRQVY
KKMGLNTGRGITTKELEQYAEIENSRNREARMIKILKHK

Sequences:

>Translated_599_residues
MEYDRIYSIRKGEYFADALKRAGKDFIPTNCIINKLLPGLGATHCELTAPRKSIIIEPNVPVIESKAKVHKNALAVYKGV
SIRQIADFLEANREKDYKLLTTPEGFNKIKEAMQTVDIDMYTECFILFDECEKLVQDVHYRDSIREPMNDFFRFQNKALI
SATPIVPEKDSRFDGFMRVLIQPDYVYRQKLKLITTNNVLETLQEVIEAKRGTVCIFCNSIDSIDSFYRLIPELSNACTF
CSEDGQYKLWKGNRRKKSMMITELERYNFFTSRFYSAVDILCKNPPHVIFVSDLYGAAQSVIDPATEAIQIIGRFRGGVN
SVTHIASIRPELECMSSSEIDHWIQGASTIFNGWKAQLARTTNIGERTLLQEAIGENSYLPYLDENGKPDSFLIANFYEK
EQVKRLYTSADLLHLAYEQTGYFVFSHEERLMPVSDNERMAIQHRLAKKKRAELIVRKLEEMEKMSKATDKKIQKRYQRM
LMNLITSTADRYIYDCFCRFGAEFVREADYNENKLRTALNVSSEHTIKKSGQMRTYIQRAFPVGAEISVQEAKSMLRQVY
KKMGLNTGRGITTKELEQYAEIENSRNREARMIKILKHK
>Mature_599_residues
MEYDRIYSIRKGEYFADALKRAGKDFIPTNCIINKLLPGLGATHCELTAPRKSIIIEPNVPVIESKAKVHKNALAVYKGV
SIRQIADFLEANREKDYKLLTTPEGFNKIKEAMQTVDIDMYTECFILFDECEKLVQDVHYRDSIREPMNDFFRFQNKALI
SATPIVPEKDSRFDGFMRVLIQPDYVYRQKLKLITTNNVLETLQEVIEAKRGTVCIFCNSIDSIDSFYRLIPELSNACTF
CSEDGQYKLWKGNRRKKSMMITELERYNFFTSRFYSAVDILCKNPPHVIFVSDLYGAAQSVIDPATEAIQIIGRFRGGVN
SVTHIASIRPELECMSSSEIDHWIQGASTIFNGWKAQLARTTNIGERTLLQEAIGENSYLPYLDENGKPDSFLIANFYEK
EQVKRLYTSADLLHLAYEQTGYFVFSHEERLMPVSDNERMAIQHRLAKKKRAELIVRKLEEMEKMSKATDKKIQKRYQRM
LMNLITSTADRYIYDCFCRFGAEFVREADYNENKLRTALNVSSEHTIKKSGQMRTYIQRAFPVGAEISVQEAKSMLRQVY
KKMGLNTGRGITTKELEQYAEIENSRNREARMIKILKHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69310; Mature: 69310

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYDRIYSIRKGEYFADALKRAGKDFIPTNCIINKLLPGLGATHCELTAPRKSIIIEPNV
CCCHHHEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCEEECCCC
PVIESKAKVHKNALAVYKGVSIRQIADFLEANREKDYKLLTTPEGFNKIKEAMQTVDIDM
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCHHH
YTECFILFDECEKLVQDVHYRDSIREPMNDFFRFQNKALISATPIVPEKDSRFDGFMRVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
IQPDYVYRQKLKLITTNNVLETLQEVIEAKRGTVCIFCNSIDSIDSFYRLIPELSNACTF
HCCCHHHHHHHHHEECHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
CSEDGQYKLWKGNRRKKSMMITELERYNFFTSRFYSAVDILCKNPPHVIFVSDLYGAAQS
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH
VIDPATEAIQIIGRFRGGVNSVTHIASIRPELECMSSSEIDHWIQGASTIFNGWKAQLAR
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TTNIGERTLLQEAIGENSYLPYLDENGKPDSFLIANFYEKEQVKRLYTSADLLHLAYEQT
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHC
GYFVFSHEERLMPVSDNERMAIQHRLAKKKRAELIVRKLEEMEKMSKATDKKIQKRYQRM
CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMNLITSTADRYIYDCFCRFGAEFVREADYNENKLRTALNVSSEHTIKKSGQMRTYIQRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHCCHHHHHHHHH
FPVGAEISVQEAKSMLRQVYKKMGLNTGRGITTKELEQYAEIENSRNREARMIKILKHK
CCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MEYDRIYSIRKGEYFADALKRAGKDFIPTNCIINKLLPGLGATHCELTAPRKSIIIEPNV
CCCHHHEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCEEECCCC
PVIESKAKVHKNALAVYKGVSIRQIADFLEANREKDYKLLTTPEGFNKIKEAMQTVDIDM
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCHHH
YTECFILFDECEKLVQDVHYRDSIREPMNDFFRFQNKALISATPIVPEKDSRFDGFMRVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
IQPDYVYRQKLKLITTNNVLETLQEVIEAKRGTVCIFCNSIDSIDSFYRLIPELSNACTF
HCCCHHHHHHHHHEECHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
CSEDGQYKLWKGNRRKKSMMITELERYNFFTSRFYSAVDILCKNPPHVIFVSDLYGAAQS
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH
VIDPATEAIQIIGRFRGGVNSVTHIASIRPELECMSSSEIDHWIQGASTIFNGWKAQLAR
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TTNIGERTLLQEAIGENSYLPYLDENGKPDSFLIANFYEKEQVKRLYTSADLLHLAYEQT
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHC
GYFVFSHEERLMPVSDNERMAIQHRLAKKKRAELIVRKLEEMEKMSKATDKKIQKRYQRM
CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMNLITSTADRYIYDCFCRFGAEFVREADYNENKLRTALNVSSEHTIKKSGQMRTYIQRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHCCHHHHHHHHH
FPVGAEISVQEAKSMLRQVYKKMGLNTGRGITTKELEQYAEIENSRNREARMIKILKHK
CCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA