| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349746
Identifier: 29349746
GI number: 29349746
Start: 5713882
End: 5714583
Strand: Reverse
Name: 29349746
Synonym: BT_4338
Alternate gene names: NA
Gene position: 5714583-5713882 (Counterclockwise)
Preceding gene: 29349747
Following gene: 29349745
Centisome position: 91.28
GC content: 44.44
Gene sequence:
>702_bases ATGGTAAAAATGAACATGTCAGACATCGATATTTCGGAACCATTATCCGATTTGTTAGCTCCTTTGAATAACGAACAAAG GGAGTTTCTGATGAACAATTATACGATACAGACCTACAAAAAGAACGAAACCATCTACTGCGAAGGGGAGACTCCCTCTC ATTTGATGTGCCTCATTACCGGCAAAGTCAAAATCTTCAAAGATGGTGTAGGAGGTAGAAGTCAGATTATCCGCATGATT AAACAGCGGGAATACTTTGCGTACCGTGCATACTTCGCAAAGGAAGACTTCGTAACTGCCGCCGCCGCTTTCGAACCTTC TGTTATCTGTCTCATCCCCATGACTGCCATCACCACGCTGGTCGCTCAAAACAACGATTTAGCCATGTTTTTTATCCGCC AGCTTTCTATCGATCTCGGCATTTCCGACGAACGTACCGTCAGCCTGACACAGAAACATATCCGTGGACGTCTGGCAGAA TCGCTGATTTTCCTCAAAGAGAGCTATGGACTGGAAGAAGACGGATCGACATTGAGTATTTATCTTTCCCGTGAAGACCT GGCAAATCTGTCGAACATGACCACCTCGAACGCCATCCGTACCTTATCACAGTTCGCTACGGAACGTCTGATCACCATTG ACGGAAGAAAGATCAAGATCATCGAAGAAGAAAAACTCAAGAAAATAAGCAAGATAGGATAA
Upstream 100 bases:
>100_bases CACGAAAGAACCTACTTTTGTGCAATCTTTTTATAGATTCGTTCATTTTCTCATTTTTTCTTTCTACTTTTGTGCTGTAT AACACAGTTTTGTAGCACCC
Downstream 100 bases:
>100_bases TACAGACCTTATACGATCATAAAAAGTGATCTGAAACTTTAACTGGAAGCCGATGTTCGTCACATCGGCTTTTTTATTTC TATACTGTTGGAACTTACCA
Product: CRP family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulatory Protein; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator CAP Family; FNR Family Transcriptional Regulator Protein; Crp-Family Transcriptional Regulator; Transcription Regulator; Fumarate And Nitrate Reduction Regulatory Protein; Global Nitrogen Regulator NtcA; Response Regulator Receiver
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MVKMNMSDIDISEPLSDLLAPLNNEQREFLMNNYTIQTYKKNETIYCEGETPSHLMCLITGKVKIFKDGVGGRSQIIRMI KQREYFAYRAYFAKEDFVTAAAAFEPSVICLIPMTAITTLVAQNNDLAMFFIRQLSIDLGISDERTVSLTQKHIRGRLAE SLIFLKESYGLEEDGSTLSIYLSREDLANLSNMTTSNAIRTLSQFATERLITIDGRKIKIIEEEKLKKISKIG
Sequences:
>Translated_233_residues MVKMNMSDIDISEPLSDLLAPLNNEQREFLMNNYTIQTYKKNETIYCEGETPSHLMCLITGKVKIFKDGVGGRSQIIRMI KQREYFAYRAYFAKEDFVTAAAAFEPSVICLIPMTAITTLVAQNNDLAMFFIRQLSIDLGISDERTVSLTQKHIRGRLAE SLIFLKESYGLEEDGSTLSIYLSREDLANLSNMTTSNAIRTLSQFATERLITIDGRKIKIIEEEKLKKISKIG >Mature_233_residues MVKMNMSDIDISEPLSDLLAPLNNEQREFLMNNYTIQTYKKNETIYCEGETPSHLMCLITGKVKIFKDGVGGRSQIIRMI KQREYFAYRAYFAKEDFVTAAAAFEPSVICLIPMTAITTLVAQNNDLAMFFIRQLSIDLGISDERTVSLTQKHIRGRLAE SLIFLKESYGLEEDGSTLSIYLSREDLANLSNMTTSNAIRTLSQFATERLITIDGRKIKIIEEEKLKKISKIG
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26458; Mature: 26458
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKMNMSDIDISEPLSDLLAPLNNEQREFLMNNYTIQTYKKNETIYCEGETPSHLMCLIT CEECCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCEEEECCCCCCEEEEEEE GKVKIFKDGVGGRSQIIRMIKQREYFAYRAYFAKEDFVTAAAAFEPSVICLIPMTAITTL CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH VAQNNDLAMFFIRQLSIDLGISDERTVSLTQKHIRGRLAESLIFLKESYGLEEDGSTLSI HHCCCCEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YLSREDLANLSNMTTSNAIRTLSQFATERLITIDGRKIKIIEEEKLKKISKIG EEEHHHHHHHHHCHHHHHHHHHHHHHHCEEEEECCCEEEEECHHHHHHHHCCC >Mature Secondary Structure MVKMNMSDIDISEPLSDLLAPLNNEQREFLMNNYTIQTYKKNETIYCEGETPSHLMCLIT CEECCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCEEEECCCCCCEEEEEEE GKVKIFKDGVGGRSQIIRMIKQREYFAYRAYFAKEDFVTAAAAFEPSVICLIPMTAITTL CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH VAQNNDLAMFFIRQLSIDLGISDERTVSLTQKHIRGRLAESLIFLKESYGLEEDGSTLSI HHCCCCEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YLSREDLANLSNMTTSNAIRTLSQFATERLITIDGRKIKIIEEEKLKKISKIG EEEHHHHHHHHHCHHHHHHHHHHHHHHCEEEEECCCEEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA