Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349234

Identifier: 29349234

GI number: 29349234

Start: 4977635

End: 4978018

Strand: Reverse

Name: 29349234

Synonym: BT_3826

Alternate gene names: NA

Gene position: 4978018-4977635 (Counterclockwise)

Preceding gene: 29349239

Following gene: 29349233

Centisome position: 79.52

GC content: 39.32

Gene sequence:

>384_bases
ATGAAATATTCGAAAAAGAAGTACAACTATTACAGTGATGATGAACGAATGTCTTATATTCGTGAGTATTTATCAAGTCC
CGAGAGCAAATCTGAGTTTTGTAAGCGTCACGGCTTTTGTGCCAAGCTTCTTACTTATTGGCTTAACAAGTATCAAATAG
AAGACAAAGATATGGGTAGATCCTCTAAACCAGTAAATAGCGATGCTATTGATTCTAGTATTTCTGAGCTCCAGAAAGAA
CTATCGCTATTGCGTGCTGAGAACCGTAAACTTCATCGGGCTCTTGCTGATGAGAGTTTACGTCACGAGGCGTGCGAAGA
ACTCATCAATCTTGCTGAATCCACGTATCATATCAAGGTACGAAAAAACTCCGATGCCAAGTAA

Upstream 100 bases:

>100_bases
TGAACATAAACTCTATAGCATTACCGATAGTACTCTATACAGCTAGATATCAATATGTAGTGTACTGAATAAGTTGACAC
TTCAAAAATCGAAAATAAAG

Downstream 100 bases:

>100_bases
TCGACACCTTGTCACAGAGGTACTCATCCCGACGCAAACGTGGTTGTATAAAGTTCCTCTGTGATTACTTCGGCATAACC
CGACAAGGTTATTACAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKYSKKKYNYYSDDERMSYIREYLSSPESKSEFCKRHGFCAKLLTYWLNKYQIEDKDMGRSSKPVNSDAIDSSISELQKE
LSLLRAENRKLHRALADESLRHEACEELINLAESTYHIKVRKNSDAK

Sequences:

>Translated_127_residues
MKYSKKKYNYYSDDERMSYIREYLSSPESKSEFCKRHGFCAKLLTYWLNKYQIEDKDMGRSSKPVNSDAIDSSISELQKE
LSLLRAENRKLHRALADESLRHEACEELINLAESTYHIKVRKNSDAK
>Mature_127_residues
MKYSKKKYNYYSDDERMSYIREYLSSPESKSEFCKRHGFCAKLLTYWLNKYQIEDKDMGRSSKPVNSDAIDSSISELQKE
LSLLRAENRKLHRALADESLRHEACEELINLAESTYHIKVRKNSDAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14995; Mature: 14995

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSKKKYNYYSDDERMSYIREYLSSPESKSEFCKRHGFCAKLLTYWLNKYQIEDKDMGR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCC
SSKPVNSDAIDSSISELQKELSLLRAENRKLHRALADESLRHEACEELINLAESTYHIKV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
RKNSDAK
ECCCCCC
>Mature Secondary Structure
MKYSKKKYNYYSDDERMSYIREYLSSPESKSEFCKRHGFCAKLLTYWLNKYQIEDKDMGR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCC
SSKPVNSDAIDSSISELQKELSLLRAENRKLHRALADESLRHEACEELINLAESTYHIKV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
RKNSDAK
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA