| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349230
Identifier: 29349230
GI number: 29349230
Start: 4974440
End: 4974970
Strand: Reverse
Name: 29349230
Synonym: BT_3822
Alternate gene names: NA
Gene position: 4974970-4974440 (Counterclockwise)
Preceding gene: 29349231
Following gene: 29349229
Centisome position: 79.47
GC content: 37.66
Gene sequence:
>531_bases ATGGCAAATCAATTATCAAGAACTGATAGTTCATCCAATCAGGATATCAGACAACGATTCAACGTAAAAAAAACAATCAT CGGAGTTATTGTTTTATTAATAGGATTATGTCACTTACCTGAAGCGATCCTCCTCATTATGGACGGCATTTCTTTAGATA GCATATTATATCTTATCGGCAATATATTACTCTGTCTGCTTGGCATATACCAACTTAAATTCCGTTCCAGGGAAATGAGA TATCTGCTGACTAAAAGCGTGGTCAAAGAGAAGAACTATTCTTTCAATCTGAAATACCTTGAACCATTGAAAGAAATGAT CGAATCAGGCAATTTTTCTAACAATATCAATATTGAGAAAGGAACAGGCGGAAATCTTCGGCTGGATGTCCTCATGTCGG CTGACAAGAAATTCGCAGCAGTGAGATTGTTACAGTTTATCCCTTACAGCTACATTCCGGTCATGGATATGCAATATCTG CGGAATGACAAGATCGCCGCTCTGGAGAATTTCCTGGAACACTCTAAATAA
Upstream 100 bases:
>100_bases AATGGAACACCGCATTTCAGTTGATTCCTCCTACATTTGCAACCACACTTAATCATAAGTGCATAGAAAATAGGTATAAA GAGTATAAAAAGAAAAGACT
Downstream 100 bases:
>100_bases GGGTCCGTTTTATTTTATCCATCCCCACTTTTATGTAATAGTGCGATAAAAACCAAACTATTTTCAAACAAATCAAGAAG AAATCTTTCTTTTTTCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MANQLSRTDSSSNQDIRQRFNVKKTIIGVIVLLIGLCHLPEAILLIMDGISLDSILYLIGNILLCLLGIYQLKFRSREMR YLLTKSVVKEKNYSFNLKYLEPLKEMIESGNFSNNINIEKGTGGNLRLDVLMSADKKFAAVRLLQFIPYSYIPVMDMQYL RNDKIAALENFLEHSK
Sequences:
>Translated_176_residues MANQLSRTDSSSNQDIRQRFNVKKTIIGVIVLLIGLCHLPEAILLIMDGISLDSILYLIGNILLCLLGIYQLKFRSREMR YLLTKSVVKEKNYSFNLKYLEPLKEMIESGNFSNNINIEKGTGGNLRLDVLMSADKKFAAVRLLQFIPYSYIPVMDMQYL RNDKIAALENFLEHSK >Mature_175_residues ANQLSRTDSSSNQDIRQRFNVKKTIIGVIVLLIGLCHLPEAILLIMDGISLDSILYLIGNILLCLLGIYQLKFRSREMRY LLTKSVVKEKNYSFNLKYLEPLKEMIESGNFSNNINIEKGTGGNLRLDVLMSADKKFAAVRLLQFIPYSYIPVMDMQYLR NDKIAALENFLEHSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20181; Mature: 20050
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANQLSRTDSSSNQDIRQRFNVKKTIIGVIVLLIGLCHLPEAILLIMDGISLDSILYLIG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH NILLCLLGIYQLKFRSREMRYLLTKSVVKEKNYSFNLKYLEPLKEMIESGNFSNNINIEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEC GTGGNLRLDVLMSADKKFAAVRLLQFIPYSYIPVMDMQYLRNDKIAALENFLEHSK CCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure ANQLSRTDSSSNQDIRQRFNVKKTIIGVIVLLIGLCHLPEAILLIMDGISLDSILYLIG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH NILLCLLGIYQLKFRSREMRYLLTKSVVKEKNYSFNLKYLEPLKEMIESGNFSNNINIEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEC GTGGNLRLDVLMSADKKFAAVRLLQFIPYSYIPVMDMQYLRNDKIAALENFLEHSK CCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA